Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0229 ATGCTCTCAGTCTCTGCTCTTTCCACTTCCGTCGACACTCACGTCGGAAACCCATTCCCGACGCTGGACGGCGGTTTCACGCCGTGGGATTACGATTACCCTGATTTTTTGTTATCCCATCACAAGCCAGTCATGACTTATTCAAGCTCCGGTTCATACCATGACCCATATAGCCAAACCCAAGCCGAAGAGGAAAAACCGGACCCGGTTAGTTCGAACCGGTTTGCGTCTATTATGGACGAGCGAAAGCGCAGGCGAATGATATCGAACCGGGAATCGGCCCGAAGGTCACGCATGCGAAAACAAAGGCATCTAGAGAATTTAAGGAACCAGGTGAACCTGTTTAGAGTGGAAAACCGGGAAATGAAAAGCGGTTTGCAGTTTCTCTTGCACCAATTGAACCGTGTGCGAACCGAAAACGATTGGCTCCGGTCTGAGCGAACCGTACTCCTGCAGAAACTGCACCACATAAGCCAAAATTTGGTTTTCCAACAAGTGCAACCGTTCTCATCTGCATGGCCATGCAATATTATCACCACGGAATAA 546 0.4927 MLSVSALSTSVDTHVGNPFPTLDGGFTPWDYDYPDFLLSHHKPVMTYSSSGSYHDPYSQTQAEEEKPDPVSSNRFASIMDERKRRRMISNRESARRSRMRKQRHLENLRNQVNLFRVENREMKSGLQFLLHQLNRVRTENDWLRSERTVLLQKLHHISQNLVFQQVQPFSSAWPCNIITTE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0229 181 Gene3D - 80 157 - -
Lja2g0229 181 Coils Coil 91 111 - -
Lja2g0229 181 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Lja2g0229 181 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Lja2g0229 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Lja2g0229 181 PANTHER BZIP TRANSCRIPTION FACTOR 31 181 - -
Lja2g0229 181 MobiDBLite consensus disorder prediction 50 72 - -
Lja2g0229 181 Pfam bZIP transcription factor 82 138 IPR004827 GO:0003700|GO:0006355
Lja2g0229 181 PANTHER BZIP TRANSCRIPTION FACTOR 44 31 181 - -
Lja2g0229 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Lja2g0229 181 SUPERFAMILY Leucine zipper domain 82 133 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0229 Lja-Chr2 2097653 2098560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0229 1 166 bZIP Transcription Factor Family AT3G49760 32.584 1.55e-23 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja2g0229 bZIP_1 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0229 - - lja:Lj0g3v0289579.1 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0229 2 2097653 2098560 Lja4g3459 4 65257167 65258112 PCT