Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0217 ATGGTTCTCAAGACCGAGCTTTGCCGGTTCAGTGGGGCGAAGATCTACCCTGGAAGAGGCATAAGATTTATTCGAAGCGATTCTCAGGTCTTCCTGTTTGTCAACTCGAAATGCAAAAGGTATTTCCACAACAGGTTGAAGCCGTCGAAGCTCACCTGGACTGCCATGTTTAGGAAGCAACACAAGAAGGACATTGCCCAAGAGGCTGCGAGGAAGAAGCGTCGCTCTACCAAAAAGCCTTACTCCAGGTCAATTGTTGGTGCTACATTGGAAGTTATTCAGAAAAGGAGAACTGAAAAGCCTGAGGTTCGAGATGCTGCTAGAGAAGCCGCTCTTCGGGAAATTAAAGAGAGAGTCAAGAAAACAAAGGATGAGAAGAGGGCAAAGAAGGCAGAAGTTCAGACAAAGGCACAAAAGTCACAAGGCAAAGGCGGCAAGGTTGCTGCACCCAAGGGTCCTAAGCTTGGTGGTGGAGGCGGGAAGCGCTGA 489 0.4888 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKTKDEKRAKKAEVQTKAQKSQGKGGKVAAPKGPKLGGGGGKR* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0217 162 MobiDBLite consensus disorder prediction 117 136 - -
Lja2g0217 162 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Lja2g0217 162 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Lja2g0217 162 Gene3D - 69 146 - -
Lja2g0217 162 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Lja2g0217 162 Coils Coil 112 136 - -
Lja2g0217 162 MobiDBLite consensus disorder prediction 64 83 - -
Lja2g0217 162 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Lja2g0217 162 PANTHER 60S RIBOSOMAL PROTEIN L24 3 162 IPR000988 -
Lja2g0217 162 PANTHER 60S RIBOSOMAL PROTEIN L24 3 162 - -
Lja2g0217 162 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Lja2g0217 162 SMART 4TRASH 8 46 IPR011017 -
Lja2g0217 162 MobiDBLite consensus disorder prediction 117 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0217 Lja-Chr2 1984984 1986480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0217 1 155 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 82.166 3.29e-83 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0217 K02896 - thj:104805122 259.225