Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0187 ATGGTGTTAGTACTAGATTATTCCTTGTGCTTCATCTTAGTAGCAGCTTTACTGGGTGGATATGCATTTGTGTTTGAGTTCCTTAGGAGAGTGAATGAGTTGTACTATGTTGGCAGGTTGGGGAAAATGCAACACCCTCTCCCACCTGGTGATCTGGGTTGGCCTTTCCTTGGCAACATGCTCACCTTCCTCAAAGCTTTCAAGTCTGATCCTGATTCCTTCATCTATGACCTTTTTTCCAGATATGGCAGGACAGGCATGTATAGAACACACTTGTTGGGGTGCCCCAGCATCATAGTTTGCACACCAGAGACATGCAGGAAGGTTTTGACAGATGAGGAGCAATTCAAGCTTGGATACCCTGCTTCCACCATGGCCCTCACAGGAAAAAGATCATTCCACGGCATCTCAATGACAGAGCACAAGCGTCTACGCCGCCTAATCACCTCTCCCATAAACGGCCATGAGGAGTTGTCGGCCTATGTTGTCCTCATAGAGGGTCTTGCTGTGAAGCTTCTGGAAGAGTTGTCTTCCATGAACAGGCCATGCCAGTTCCTCACAGAGTTGAGGAAGTTTGCTTTTGAGGTCATCACTACCATTTTTGTAGCTTCTGATGGTGATCATGTGGACCTTGGCTTGTTTGAGAACCTGTACACTGATTTGAACCGGGGAATGAAGTCCCTCGCCATTAACCTCCCAGGATTTGCATTCCATAAAGCACTCAAGGCACGGAAGAAGTTGATGAAGCTATTGCAAGCCCTGGTGGACCGGAAGAGGAGGAGCAATAATAGAGAGACAATTAAGAGCAAGAAAGATATGATGGATTTGTTGATGGAAGTCAAAGATGAAGATGGTAGGCAGCTGGAAGATGAAGACATTATAGACTTAGTTCTGGTTTTCTTGTTAGCTGGTCATGAAAGCTCTGCTCATGGGATATTGTGGACAATTATCTACCTCATTGATCACCCACATGTACTCCACATGGCCAAGAAAGAACAAGAGGAGATCACGGAAAGAAGACCCTTCATGCAGAAAGGGCTGAACCTTCATGAAATTAAGCAAATGAATTATCTCTCAAAGGTTATTGATGAGATGCTGCGCAGAACAAGTATCTCATTTGCAAACTTTAGACAGGCAAAAGTTGATGTCAACATCAATGGCTATACTATACCAAAAGGATGGAAAGTTTTGGTGTGGAACAGAGGTGTTCACATGGATCCTGAGACTTATGTCAACCCAAAGGAGTATGATCCTTCCAGATGGGATAATTACAGGGCAAGAGCAGGGTCATTCCTTCCATTTGGATTAGGAAGCAGGTTTTGTCCCGGAGGTGACCTGGCCAAGCTTCAGATCACTATTTTCCTCCATCATTTTCTTCTTAATTACAGGATGGAAAGAATGAATCCGGAGTGTGCAGTTACTTACCTACCATTGCCAAGGCCTTTAGACAATTGCCTTGCAACAATTATAAAAGCGACATGA 1482 0.4447 MVLVLDYSLCFILVAALLGGYAFVFEFLRRVNELYYVGRLGKMQHPLPPGDLGWPFLGNMLTFLKAFKSDPDSFIYDLFSRYGRTGMYRTHLLGCPSIIVCTPETCRKVLTDEEQFKLGYPASTMALTGKRSFHGISMTEHKRLRRLITSPINGHEELSAYVVLIEGLAVKLLEELSSMNRPCQFLTELRKFAFEVITTIFVASDGDHVDLGLFENLYTDLNRGMKSLAINLPGFAFHKALKARKKLMKLLQALVDRKRRSNNRETIKSKKDMMDLLMEVKDEDGRQLEDEDIIDLVLVFLLAGHESSAHGILWTIIYLIDHPHVLHMAKKEQEEITERRPFMQKGLNLHEIKQMNYLSKVIDEMLRRTSISFANFRQAKVDVNINGYTIPKGWKVLVWNRGVHMDPETYVNPKEYDPSRWDNYRARAGSFLPFGLGSRFCPGGDLAKLQITIFLHHFLLNYRMERMNPECAVTYLPLPRPLDNCLATIIKAT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0187 493 SUPERFAMILY Cytochrome P450 45 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 Pfam Cytochrome P450 48 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 Gene3D Cytochrome P450 39 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PANTHER CYTOCHROME P450 88D6 25 470 - -
Lja2g0187 493 PANTHER CYTOCHROME P450 26 25 470 - -
Lja2g0187 493 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0187 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0187 Lja-Chr2 1612465 1615850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0187 27 489 Cytochrome P450 AT1G05160 54.624 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0187 K04123 - qsu:112005461 676.011