Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0154 ATGGAGGAACGATATGAGCCATTGAAGGACATTGGTTCCGGGAGCTTTGGAGTGGCCAAGCTTGCCAAAGATAAGGAAACAGGGGAGCTTGTTGCAGTCAAGTACATAGAGAGGGGGGAGAAGATTGATGAGAGTGTTAAGAGGGAGATAGTCAACCACCGCTCTCTAAGGCATCATCCAAACATTATTGGGTTCAAAGAGGTATTTCTTACCCCTACTCATTTAGCTATTGTCCTGGAGTATGCTGGTGGTGGTGAACTCCTTCAAAGGATACGCAAAGCTGGTCGATTTAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTAATAAATGGAGTTAGCTACTGTCATTCCATGCAAATTTGCCATAGAGATCTGAAATTGAAGAACACTCTATTGGACGAAAATCCAGCTCCTAGACTTAAAATTTGTGACTTTGGTTTCTCCAAGTCCGCTTTACTGCACTCTCAACCTAAATCAAGAGTTGGAACTCCTGCATACTTTGCTCCAGAGGTTTTGTCACAAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCATGTGGTGTGGTTCTTTATGTCATGTTAGTAGGATCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAGAGAGTATTAGGAGAATAGAGAGTGTTCAATACTCCATACCTGACTATGTACGCGTTTCTGCAGAGTGTAGGCATCTTCTCACTCATATTTTTGTTGCCAATCCTGCCGAGAGGATCACCATCTCAGAGATAAAGCAACACCCTTGGTTTCAGAAGAACTTGGCTAGAGAGATGATTGAGGCTGGTAAAAAAGGTGGTGATGAAACACAAGAGGACCAACCAAGCCAAAGTGTGGAAGAAATCATGAGAATCATACAAGAGGCAAAGACACCAGGACTAAAAACCAAAGGTGGTGAGAATGCTGGCACATGCTCATCTAATGCTGTGGATGTTGATGTGGCTGGAAAAGAAGTTGATGTTAGTGGAAGGGGCAGAGCCAGGAATTTACAGCAAGGGGGGCCGAGATCAAATAGCATATAG 1056 0.4318 MEERYEPLKDIGSGSFGVAKLAKDKETGELVAVKYIERGEKIDESVKREIVNHRSLRHHPNIIGFKEVFLTPTHLAIVLEYAGGGELLQRIRKAGRFSEDEARFFFQQLINGVSYCHSMQICHRDLKLKNTLLDENPAPRLKICDFGFSKSALLHSQPKSRVGTPAYFAPEVLSQKEYDGKIADVWSCGVVLYVMLVGSYPFEDPEDPRNFRESIRRIESVQYSIPDYVRVSAECRHLLTHIFVANPAERITISEIKQHPWFQKNLAREMIEAGKKGGDETQEDQPSQSVEEIMRIIQEAKTPGLKTKGGENAGTCSSNAVDVDVAGKEVDVSGRGRARNLQQGGPRSNSI* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0154 351 SUPERFAMILY Protein kinase-like (PK-like) 3 267 IPR011009 -
Lja2g0154 351 MobiDBLite consensus disorder prediction 301 320 - -
Lja2g0154 351 PANTHER SERINE/THREONINE KINASE 3 336 - -
Lja2g0154 351 SMART serkin_6 5 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0154 351 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Lja2g0154 351 ProSiteProfiles Protein kinase domain profile. 5 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0154 351 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Lja2g0154 351 Gene3D Transferase(Phosphotransferase) domain 1 83 269 - -
Lja2g0154 351 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 336 - -
Lja2g0154 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lja2g0154 351 Pfam Protein kinase domain 5 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0154 351 MobiDBLite consensus disorder prediction 331 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0154 Lja-Chr2 1259963 1262685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0154 4 265 CBL-interacting serine-threonine protein kinases AT4G24400 43.333 2.31e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lja2g0154 Pkinase 2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0154 K14498 - gmx:547790 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0154 2 1259963 1262685 Lja2g0154 2 1259963 1262685 ECH