Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0153 ATGGGTCGTAAACCCAGTGAACAGAACTCTTCCCTGTCACACCGTTTGATCCTCATCTTGGTGTGCCTTGCTTCGTGTGGTTTGGTCTACGCTTTACTCTCTTCTGTGCTCCCAAACGGCATAAGCAGCAGCAGAAGCTTTTCCGTTTCTGAGCTTACAACTTCGTTGGCATTGGTTCAAGGCGGTGCTGATGGTGGATGCTGTAGAGGGATTGAGAATTATGAGCTTTGGGGTGCAGCGGTCAAGTGGGGTTCTGACTTCAAGTTCAATAGTTCACAAGATTGCTGCAACGCGTGCAAATCTATGTGCACTGGGAAGGATGGACCCTGCCTCTGTGATACATGGGTGTTTTGTGGGAATCGTGAGGCTTGTGGATCCAAATTTGGTGAGTGTTGGTTGAAGAAACAAAAGGACAGCTTCGCCCCTGAACGGCAAGAAGGAGTGCCTCCAGGGGAAATAGTTGGCTGGACTTCTGGTATCATCTTTGGAAAAGGAGAGGGAATTATTGGATTGGAAACTGAATATGGAACTCTTCACATAAAACTTTTCCCTGACTGTGCCCCCAACTCTGTTGCCTACATTCTAGAATTGTTGGCTTTGCACCATTGTGCAGGCTGCCAATTTTACCGTGCAGAGAGCCGAGGACAATCATGGGATTCAGAAGGAAACCATATAAAAAATGCTTCATTTGGTCCCCCTTATGCATTAATTCAAGGGACCCTGGAAGCTTATGGCACACCATTCAATAAACTTCCTGTGGAAGATTGTCCAACCTTAAGAAGGGGCTCAGTTGCTTGGATTGGTTCTGGTCCTGAATTCTTTATTAGCCTTGCTGACCATTCTGAGTGGAAACATGAATACACTGTCTTTGGTTCTGTTCTTCCAGAAGATATGAATGTTGCTGAGAAAATTGCGACACTCCCAACATTGTCTGATGTTTGGAACAACGTTAACGTGACCGTTTTGGAAAAACCTGTTCCCTTGTCGCTGCGAAGAATTGAGAAAAGCCATGAAGATTGA 1020 0.4578 MGRKPSEQNSSLSHRLILILVCLASCGLVYALLSSVLPNGISSSRSFSVSELTTSLALVQGGADGGCCRGIENYELWGAAVKWGSDFKFNSSQDCCNACKSMCTGKDGPCLCDTWVFCGNREACGSKFGECWLKKQKDSFAPERQEGVPPGEIVGWTSGIIFGKGEGIIGLETEYGTLHIKLFPDCAPNSVAYILELLALHHCAGCQFYRAESRGQSWDSEGNHIKNASFGPPYALIQGTLEAYGTPFNKLPVEDCPTLRRGSVAWIGSGPEFFISLADHSEWKHEYTVFGSVLPEDMNVAEKIATLPTLSDVWNNVNVTVLEKPVPLSLRRIEKSHED* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0153 339 Gene3D - 162 325 IPR029000 -
Lja2g0153 339 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 171 318 IPR002130 GO:0000413|GO:0003755
Lja2g0153 339 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 336 - -
Lja2g0153 339 PANTHER EXPRESSED PROTEIN 1 336 - -
Lja2g0153 339 SUPERFAMILY Cyclophilin-like 164 321 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0153 Lja-Chr2 1254697 1258763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0153 164 294 U-box Gene Family AT5G67530 26.087 8.89e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0153 - - gmx:100820360 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0153 2 1254697 1258763 Lja2g0153 2 1254697 1258763 ECH