Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0151 ATGACTTCTCAGAACCAGACATCTATGAACTTATTCAGTGTAATGAAGCCTGTGACCAAGGAGCCTAAAGGTACACAGATGACAATCTTCTATGCTGGGCAAGTTTATGTGTTTGATGATTTTTCTGCTGACAGAGCCAAGGAGATCATGTCCTTGGCCACCAAAGGAAAAAACACTGAAAGCCAGAACAACTACCCTAATAAGGGAATTCAGAGACACCCTTCATTTCCTGCTAGTTCTAGCAGGCCATTTCCTTTTCATGTGAATAATATCATGCCTAGCACTGCTAGCAATTTGATCCAAGAGCAATCTCAAGCACCACCCACACCTATTGTTGTTGATCTTCCAATGACTAGGAAAGCTTCACTTTACCGATTCTTGGAGAAAAGGAAAGATAGAATTGCTGCCAGAGCACCATACCAAGCAAGCAGTCCCATGGCAAAAGCTAATAAGACTGCTGATGAATCCATGTCATGGCTGGGTTTGGCACCTAAATCACCACAAGACAAATCTGAGAGTAGCTCCAGCTCTGTGTTATTTTAA 543 0.4254 MTSQNQTSMNLFSVMKPVTKEPKGTQMTIFYAGQVYVFDDFSADRAKEIMSLATKGKNTESQNNYPNKGIQRHPSFPASSSRPFPFHVNNIMPSTASNLIQEQSQAPPTPIVVDLPMTRKASLYRFLEKRKDRIAARAPYQASSPMAKANKTADESMSWLGLAPKSPQDKSESSSSSVLF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0151 180 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 163 IPR040390 -
Lja2g0151 180 Pfam Jas motif 116 141 IPR018467 -
Lja2g0151 180 MobiDBLite consensus disorder prediction 138 180 - -
Lja2g0151 180 Pfam tify domain 22 53 IPR010399 -
Lja2g0151 180 ProSiteProfiles Tify domain profile. 20 55 IPR010399 -
Lja2g0151 180 PANTHER PROTEIN TIFY 10A 10 163 - -
Lja2g0151 180 SMART tify_2 20 55 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0151 Lja-Chr2 1252001 1253110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0151 9 163 Tify Gene Family AT1G19180 40.127 1.23e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lja2g0151 tify 5.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0151 K13464 - gmx:100306332 164.851