Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0137 ATGTGCCGGCAAAATTCTCCAGTGCATCGCGCCCGCGAAGAAGAAATCGTAGCTGATGAGAGCCTCTTGATTTATTGCAAGCCTGTTGAACTCTACAACATTCTCTATCGCCGTGGTCTTCATAATCCTACATTTCTGAGGAGATCTTTGCGCTATAAAATAAGAGCAAGGCAAAAAAAGAGGTTGAGAGCAGGAATTGTGATTTTCAACTACAGGGACCGTTGCAACATGGTTCGGAAGACTGAAGTGACTGAAGACTTTTCTTGTCCATTTTGCTTGATGCAGTGTGCGAGCTTTAAGGGTTTGCGATTTCATCTTTGTTCATCGCATGATCTATTCAACTTTGAGTTCTGGGTTACTGAAGATTACCAAGCAGTGAACGTCTCTGTGAAAATTGACATATTAAGATCTGAGAATGTTGCTGATGGAGTAATACCACAATCACAAACGTTCTTCTTCTGTTCAAGACATCGAAAGCATAGACGAAAGGACTCTGTTCAAAATGAAAAGCGTGCCAATGTAAAGTTCCTGGAGTTGGACTCACCAGAAGGCATACAGAATGGATTTTTGCAGAAAGACGATGATATCCTGTCCAGCAAAGGGGAGAATATGTCTAAAGCATCTCATACCGAGAAGAATCTGCAGAATGAAAGACACGGAGGGGGAAGTTTTGGTCCTGATCCTCCTAGCCCCATGGACTGCCTGGAACATGTAGAATCTAGTTTCAACATTCCAGGAGTTTCCATTGCCATGCCCCAATCTTCTGGGGACCCTGAATGTGGTAAAACAATAAATAAAAATGGTCCTGCTCTGCCTACCAAAGCAAAGAAGTTGAATGTGGATCGCTCAGACTCAAGGAATCGCATGCTCCTGCAGAAGAGACAGTTCTTTCACTCACATAGAGTTCAGCCTATGGCACTAGATCAAGTGTTATCAGATCGTGATAGTGAAGATGAGGGTGATGATGACATTGCTGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGACGTTTCCAAAGATGAAAAGCAGCTCATGCATCTCTGGAACTCTTTTATGAGGAAACAAAGGGTGCTGGCTGATGGTCACATGCCATGGGCCTGTGAGGCATTTTCGAAGCTTTATGGAAAAGAGCTGATCTCATCCCCAGCTTTATTTTGGTGTTGGAGATTATTCATGATCAAACTTTGGAATCACGGTCTTCTTGATGCTTCCTCAATGAACAACTGTAGTAAAATATTAGATAGTTTCAGAAACGAGGGATCGGATACTGGCAAAAAATAA 1287 0.425 MCRQNSPVHRAREEEIVADESLLIYCKPVELYNILYRRGLHNPTFLRRSLRYKIRARQKKRLRAGIVIFNYRDRCNMVRKTEVTEDFSCPFCLMQCASFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDILRSENVADGVIPQSQTFFFCSRHRKHRRKDSVQNEKRANVKFLELDSPEGIQNGFLQKDDDILSSKGENMSKASHTEKNLQNERHGGGSFGPDPPSPMDCLEHVESSFNIPGVSIAMPQSSGDPECGKTINKNGPALPTKAKKLNVDRSDSRNRMLLQKRQFFHSHRVQPMALDQVLSDRDSEDEGDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHMPWACEAFSKLYGKELISSPALFWCWRLFMIKLWNHGLLDASSMNNCSKILDSFRNEGSDTGKK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0137 428 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 61 427 - -
Lja2g0137 428 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 63 - -
Lja2g0137 428 PANTHER POLYCOMB GROUP PROTEIN 61 427 - -
Lja2g0137 428 PANTHER POLYCOMB GROUP PROTEIN 1 63 - -
Lja2g0137 428 MobiDBLite consensus disorder prediction 199 216 - -
Lja2g0137 428 MobiDBLite consensus disorder prediction 199 227 - -
Lja2g0137 428 Pfam VEFS-Box of polycomb protein 278 413 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0137 Lja-Chr2 1133863 1142200 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0137 1 68 C2H2 Transcription Factor Family AT5G51230 51.471 2.83e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0137 - - gmx:100807112 725.702