Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0135 ATGGCTTCCCTTATCCTTTACATACTCTCCATTCTATTCCTTCAAGTTGTTGTGTTAGTTTCAGCAAACGTTACTCGGACTTCCACACTCTCCACCACTGACAACGATGCATGGCTTTCACCTTCAGGTGAATTTGCTTTCGGATTTCGCCAACTTAATGGCACAACATTGTTTATGGTTGCCATATGGTATAACAAAATACCGGACAAAACCATTGTTTGGAACGCGAAAACACACGATGACGATAGCCTCGTACAAGCACCTTCAGGATCCCAGGTTCAGCTCACATCAGGAGGTCTCATGCTGACAAGTCCTCAAGGAGAATCCATTTGGACAGCACAACCAAACACTCCTGTTTCCTATGCAACTATGCTTGATTCTGGAAACTTTGTTCTTGTGAACCAGAGTTCTGTTTTTGTGTGGGAAAGTTTCAATTTTCCCACTGACACGTTGTTGCCTAATCAATCTCTGGAGCTAGATGGAAAACTAACTTCTAGAATCACTGAGGCCAATTATACAAATGGAAGGTTCCAGCTTTATTTTGAGGATGGTGCTGTCTGGTTAAGTCCACTTGCTTGGCCTACTCAATTGCATTACACATTTTATTATAGAATTGATGCTGCTCATTCTGCTTCTAGATTAGTGTTTAATGAATCAGGGAATGTTTATGTAGAGACAACAAATGGAACTAAAATCCAACCTCAGGGTACAACATGGGGAAACAACTCAACTCTTCATCCTAACTTATATTACTACAGAGCAACGCTTGATTTCCATGGAGTTTTCACACAGTATGCACATCCAAGGGACAACAAGGCCAAACAAGGGTGGAGAATTGTGCGGTTTGTTCCTGAAAATATTTGTATTGCAATATTCAGTGAAATGGGTAGTGGCTCTTGTGGCTATAATAGCTACTGCTCCATGCAAAATCAGAGGCCTAGCTGCAGTTGCCCTGATGGGTATTCATTTATAGATCCAAGTAATGAATTTGGTGGGTGCCAACCAAAATTCAAGCTCGGTTGTGGGGAAGATAATGATGAACAGCTATATGATTTTACTATTCTTAAAGATGTAGACTGGCCTCTATGTGATTATGAAAAGATGCAGCCTTTCTCTCAACAAGACTGCCAGCAATCTTGCTTGAATGATTGCATGTGTGCTGTTGCAATTTTCAACAACCAAACTTGTTGGAAGAAAAGGTTACCTATCGCCAATGGAAGAGCACAGAGTGGTGGTCAAATAGCCCTCATCAAAACAACAGTGGCTCCTCAAGGTAACATAGGTCCTCCAAGTTCTCTTGATTCAAACAAAGAAGATGGAGTTAAGACAATTCTTCAAGGTTTACTTATAGGTTCAAGTGTTATTAACAGTATACTCTTGGCTACTGTTGTTTTGATTCTTGTTAAAAAGCCAAAAAGAATCGTCCAAGCTGCGAGTCTTTTAGAAACAAATTTACATTCGTTTACCTATGAAGCATTGAAAGAAGCCACATGGGGTTTTAGTGAAGAACTAGGCAGGGGTTCGTTTGGCATTGTTTACAAAGGTAAACTAGAAGCACCCTCTTATACTATGGTTGCTATCAAGAGATTGGACAGATTTGCACAAGAAAGAGAGAGAGAATTCAAGACTGAATTGAGTGCCATTGGTAAAACTTGCCACAAGAATCTAGTGAGGTTGATTGGATTTTGTGATGAGGGAATCCACAGGCTGCTGGTGTATGAGTACATGAGCAATGGTAGTCTTGCAAACATCCTATTTGGACAATCCAAACCCATTTGGAATCTAAGAGTTGGATTTGCTCTGGGGATTGCAAGAGGGCTGGTCTACTTACACGAAGAGTGTGACACACCCATCATTCATTGTGATATAAAGCCTCAAAACATACTCATAGATGAGCATTTCACAGCAAAGATCTCTGACTTTGGATTAGCCAAGTTGTTGTTTGACCAAAGCAGGACCAATACCGGGATCCGTGGAACAAGAGGATACGTTGCTCCTGAGTGGTTTAAGAATGTTCCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGTGTGATGTTGCTGGAAATCATTTGCTGCAGAAGAAGTGTGATGCTGATGGAGTCTGGGGAGGAGGAAAAAGCCATCTTGATAGATTGGGCTTATGATTGTTATATTGAAGGGAGAGTAGATTCTCTGGTGGAGAATGATGAGGAGGCTTTGGCTGACATTGGAAGGTTACAAAAGTGGGTAATGATAGCAATTTGGTGCATTCAAGAGCATCACGAAATGAGGCCAACAATGGGGAAGGTCATGCAAATGCTACAAGATTTGGTTGAAGTCCCTACCCCACCATCCCCTCTTTCCTTCAGTTCGTTTTCTTGA 2364 0.4137 MASLILYILSILFLQVVVLVSANVTRTSTLSTTDNDAWLSPSGEFAFGFRQLNGTTLFMVAIWYNKIPDKTIVWNAKTHDDDSLVQAPSGSQVQLTSGGLMLTSPQGESIWTAQPNTPVSYATMLDSGNFVLVNQSSVFVWESFNFPTDTLLPNQSLELDGKLTSRITEANYTNGRFQLYFEDGAVWLSPLAWPTQLHYTFYYRIDAAHSASRLVFNESGNVYVETTNGTKIQPQGTTWGNNSTLHPNLYYYRATLDFHGVFTQYAHPRDNKAKQGWRIVRFVPENICIAIFSEMGSGSCGYNSYCSMQNQRPSCSCPDGYSFIDPSNEFGGCQPKFKLGCGEDNDEQLYDFTILKDVDWPLCDYEKMQPFSQQDCQQSCLNDCMCAVAIFNNQTCWKKRLPIANGRAQSGGQIALIKTTVAPQGNIGPPSSLDSNKEDGVKTILQGLLIGSSVINSILLATVVLILVKKPKRIVQAASLLETNLHSFTYEALKEATWGFSEELGRGSFGIVYKGKLEAPSYTMVAIKRLDRFAQEREREFKTELSAIGKTCHKNLVRLIGFCDEGIHRLLVYEYMSNGSLANILFGQSKPIWNLRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEHFTAKISDFGLAKLLFDQSRTNTGIRGTRGYVAPEWFKNVPVTVKVDVYSFGVMLLEIICCRRSVMLMESGEEEKAILIDWAYDCYIEGRVDSLVENDEEALADIGRLQKWVMIAIWCIQEHHEMRPTMGKVMQMLQDLVEVPTPPSPLSFSSFS* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0135 787 PIRSF SRK 1 787 IPR024171 GO:0004674
Lja2g0135 787 Gene3D - 21 146 IPR036426 -
Lja2g0135 787 Gene3D Phosphorylase Kinase; domain 1 463 575 - -
Lja2g0135 787 SUPERFAMILY Protein kinase-like (PK-like) 483 768 IPR011009 -
Lja2g0135 787 Gene3D Transferase(Phosphotransferase) domain 1 576 776 - -
Lja2g0135 787 Gene3D - 147 273 IPR036426 -
Lja2g0135 787 CDD STKc_IRAK 504 771 - -
Lja2g0135 787 SMART serkin_6 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0135 787 ProSiteProfiles Protein kinase domain profile. 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0135 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 785 - -
Lja2g0135 787 Pfam Protein kinase domain 501 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0135 787 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 785 - -
Lja2g0135 787 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Lja2g0135 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 187 IPR036426 -
Lja2g0135 787 CDD PAN_AP_plant 337 419 - -
Lja2g0135 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Lja2g0135 787 SMART blect_4 29 147 IPR001480 -
Lja2g0135 787 Pfam D-mannose binding lectin 71 162 IPR001480 -
Lja2g0135 787 ProSitePatterns Protein kinases ATP-binding region signature. 504 528 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0135 Lja-Chr2 1127672 1130075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0135 484 773 Receptor kinase-like Gene Family AT5G45780 42.617 1.08e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja2g0135 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0135 - - gmx:100775269 1094.34