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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lja2g0109
ATGGCATCTCTCTTAATTCTCATTCTGCAATTTCTTCTGGTTATTTTCACTTACATATTCTATGCAGCTACAACCGTGACATGCGTACACCACCACCACGACATTGCCTTCAATCCACTGTCTTTAAAGAAGAACCACAGTTGGATCGGACCGGTCGGTCGCCGTGTAATCACAGTTGACGTTAACGGCGGTGGCCAGTTCCAGTGCGTCCAAGACGCCGTCAATGCTGTGCCGGAAAACAATAGAATGAACGTCCTCATTCAAATCAGCGCCGGTTACTACATAGAGAAGGTGGTGGTGCCGGCGACAAAGCCCTACATTACATTTCAGGGCGAGGGAAAGGGAGTGACGGTGATTGAGTGGCATGATAGAGCAAGTGATCCTGGTCCTAACGGACAACAGTTGCGAACTTACAGAACTGCTTCTGTAACAGTTTTTGCTAACTATTTTTCTGCTAGGAATATCAGCTTCAAGAACACCGCACCTGCACCAATGCCAGGGATGCAGGGATGGCAAGCGGCGGCGTTTCGAATATCGGGGGACAAAGCATTCTTCTCCGGGTGTGGCTTCTACGGTGCGCAGGACACGCTTTGTGACGATGCCGGCAGGCACTATTTCAAGGAATGCTATATTGAGGGCTCTATTGATTTCATTTTTGGCAATGGAAGGTCCATGTACAAGGATTGCCAGCTTCATTCAATAGCAACGAGGTTCGGTTCAATAGCAGCACACGATAGGAAGTATCCAAACGAGAAGACAGGCTTCACGTTCGTAAGGTGCAGGGTGACAGGTACAGGCCCAATATATGTGGGCCGAGCAATGGGCCAGTACTCCAGAATTGTGTACTCCCACACATACTTCGATGATATAGTTGCACATGGTGGTTGGGATGATTGGGACCATGCCAACAACAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGGCCTGGAGCAGGGGCTGTGCGTGGGGTCTCATGGGCCAGAGAGTTAGATTTTGAATCGGCCCATCCATTTCTGGTTAAGAGCTTCGTTAATGGAAGACACTGGATAGCACCCTCAGATGCTTAG
1077
0.4912
MASLLILILQFLLVIFTYIFYAATTVTCVHHHHDIAFNPLSLKKNHSWIGPVGRRVITVDVNGGGQFQCVQDAVNAVPENNRMNVLIQISAGYYIEKVVVPATKPYITFQGEGKGVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCQLHSIATRFGSIAAHDRKYPNEKTGFTFVRCRVTGTGPIYVGRAMGQYSRIVYSHTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGAGAVRGVSWARELDFESAHPFLVKSFVNGRHWIAPSDA*
359
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lja2g0109
358
ProSitePatterns
Pectinesterase signature 2.
211
220
IPR033131
-
Lja2g0109
358
PANTHER
ACYL-COA THIOESTER HYDROLASE YBHC-RELATED
29
357
-
-
Lja2g0109
358
Pfam
Pectinesterase
57
349
IPR000070
GO:0030599|GO:0042545
Lja2g0109
358
Gene3D
-
53
357
IPR012334
-
Lja2g0109
358
PANTHER
PECTINESTERASE 68-RELATED
29
357
-
-
Lja2g0109
358
SUPERFAMILY
Pectin lyase-like
53
355
IPR011050
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lja2g0109
Lja-Chr2
828873
831441
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lja2g0109
5
358
Carbohydrate Esterase
AT5G47500
71.788
0.0
545
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lja2g0109
-
-
cam:101501763
638.647
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