Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0104 ATGGGAAGCATGGAAAATGTAGCAATAATCGGAGGATTGATTGGAATCCAAGTTATCTACGCAGGGAACGCCGTGCTGATGAGCTATTGCATGTCATTGGGCCTCAGCGTTCTCACCATTATCATTTTCACTTCCTTCGCTACGTTCCTTATGCTCTTCCCCATTGCCTTTTATTTTGAAAGGAGTAAGTGGCCCAAAAATTGGAGTTTCAAGTTTATTATGCACCTATCATTTCTTTCATTTGGAGGATTAGCTTTTCAGTCTTTATTCCTCAAAGGAATCAATCTAACTTCGCCAGCAATGGGAACCGCCATGCCAAACCTTGCCCCAGGTCTTATTTTCATCATCGCATGGACTTTTGGGTTAGAGAAAGTCAACTTAAGCAACAATCTAAGCAAAATTAAAATCTTTGGGACATTGCTTTGTGTTGTGGGAACTCTCACAATGAGCATAATGCAAAGCATTTCTGCACCTGCAACTGAGATAAAGGATACCACAGTTCAATTATCATCGACACCATCAGATTTCATCTTTGAAATGCAGAAGATAATCGGTTGCCTCTATCTCATGGCTGCAGTCATAATATTGTCAAGCAATGTTGTCCTCCAGGCTTTTGTTCTTGGAGATTTTCCTGCACCAATGTCCTTGAGTGCAATCACATCATTGTTTGGAGCTTTCATGACTACAATAGTGCAATTAATTGAAGAACGTGACTTGAAAATCGGTTGGCAAATCGTGAGTTTAGGAGACATGATTGCCTATTCTGTTCTGGCAGGTGCAGTAAGCGGAATAAGCCTAAGCTTCAACGGGTGGGCACTTAAGAAAAGAGGACCAGTCTTTGTCTCCATGTTTAACCCCATTGGAACTGTTTGCTCTGTCATTTTCTCTGTCATTTCTCTGGGAGAAACTATTAATATTGGAAGCCTTGGAGGCATGCTCATCATGTTCACTGGGCTTTATTTAGTTCTTTGGGCCAAAGGGAAAGAAGGATACACAGATGGAGATGTCTTAAAGTGTGAGTCTTAA 1026 0.4123 MGSMENVAIIGGLIGIQVIYAGNAVLMSYCMSLGLSVLTIIIFTSFATFLMLFPIAFYFERSKWPKNWSFKFIMHLSFLSFGGLAFQSLFLKGINLTSPAMGTAMPNLAPGLIFIIAWTFGLEKVNLSNNLSKIKIFGTLLCVVGTLTMSIMQSISAPATEIKDTTVQLSSTPSDFIFEMQKIIGCLYLMAAVIILSSNVVLQAFVLGDFPAPMSLSAITSLFGAFMTTIVQLIEERDLKIGWQIVSLGDMIAYSVLAGAVSGISLSFNGWALKKRGPVFVSMFNPIGTVCSVIFSVISLGETINIGSLGGMLIMFTGLYLVLWAKGKEGYTDGDVLKCES* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0104 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Lja2g0104 341 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020|GO:0016021
Lja2g0104 341 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Lja2g0104 341 PANTHER WAT1-RELATED PROTEIN 9 338 IPR030184 GO:0016021|GO:0022857
Lja2g0104 341 PANTHER WAT1-RELATED PROTEIN 9 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0104 Lja-Chr2 791020 794446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0104 4 333 Nodulin-like Gene Family AT5G47470 57.530 3.81e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0104 - - aprc:113870214 508.064