Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0089 ATGGCTAGTGGGTGGGTGAAGTCATTGCAATGCAAGTCCAAAGCCTTTGAAGATGTCTACCACCCAAATTCCAAACACCTTATCCCCAGTGCCAGTTGCAGAAAGAGCGTTCAAAACATCAAAGACGTTGTTCTCGACACCACCAAGCCCAAGCCCAAACCCAAGCCCAAAAAACCACTCCAGAAACACCCAAGTTCCAGATACCCAACAACCTCTTCCACCAAACCTGATTTCGAAACAACCACTGTCAACCGCTCCCGGAGCACAACCACCACCAACACCCGCCATGCCCCGACGCCGGACCCTCGCTTTCCTTCCTTGACAGAGCTTACAGAAGGGCATCCTTCGCGGAACGTGGTTGAGATTATCTTCCACACAAGCTGGGGACCCAAACCGTTTTCGGGTCGGGTCGAGATGATTTTCAAGGTGCACAATGGGTCACGCACGGTGTCGCGGTTCGAGGAGTATCGTGAGGCGGTGAAGGTTCGGGCCGGGTCGGCGAAGGGGAGCGAGGATTGGGAGGAGAATGCGCGTTGTGTTGCCGATGGGAATGAGGTGATGAGGTTTCACTGCTTGGGTCCCACATCGGGTGGTGGTCCTTACGGCGGGGCTTGTGCGTGGTCGTTTCCCGGCGGGAAAGGGTCGGCGATCTGCACGTTTTCCGGTAGCGGCGGCGCGCATGAGAGCTCCGGTGGAGGGAAGGGAAGAAGGGCTATGTTGGTGTGCCGGGTCGTAGCGGGTCGGGTTTCGAAACAAATAGGGTTTATGGACTCGTTGTTGGATGGGCGAGTTGGGTTTGACTCAGTGAGTGGGGACAACGGCGAGTTGTTTGTGTTTGACTCGCGTGCTGTATTGCCTTGTTTTCTTATCATTTATAAATTGTAA 885 0.5469 MASGWVKSLQCKSKAFEDVYHPNSKHLIPSASCRKSVQNIKDVVLDTTKPKPKPKPKKPLQKHPSSRYPTTSSTKPDFETTTVNRSRSTTTTNTRHAPTPDPRFPSLTELTEGHPSRNVVEIIFHTSWGPKPFSGRVEMIFKVHNGSRTVSRFEEYREAVKVRAGSAKGSEDWEENARCVADGNEVMRFHCLGPTSGGGPYGGACAWSFPGGKGSAICTFSGSGGAHESSGGGKGRRAMLVCRVVAGRVSKQIGFMDSLLDGRVGFDSVSGDNGELFVFDSRAVLPCFLIIYKL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0089 294 Gene3D - 105 293 - -
Lja2g0089 294 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 293 - -
Lja2g0089 294 SUPERFAMILY ADP-ribosylation 106 293 - -
Lja2g0089 294 MobiDBLite consensus disorder prediction 64 99 - -
Lja2g0089 294 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 293 - -
Lja2g0089 294 MobiDBLite consensus disorder prediction 42 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0089 Lja-Chr2 677366 678560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0089 106 293 C2H2 Transcription Factor Family AT5G54630 36.937 2.04e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0089 - - gmx:100804686 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0089 2 677366 678560 Lja2g0089 2 677366 678560 ECH