Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0088 ATGTCGGCTTGCACAGACGAAGACCCTCGTCTCCATGGCATCCGAACTAAGATTCGCGTCGTCCCCAATTTCCCCAAATCGGGTATCATGTTCCAAGACATCACTACTCTTTTGCTCGACCCCAAAGCTTTTAAGGACACCATCGATTTGTTCGTTGAGCGATACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGGGGTTTTATTTTTGGTCCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCATTGAGAAAACCAAAGAAGTTGCCTGGGAAAGTTATTTCTCAAGAATACATTTTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAATCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACGCTCTGTGCAGCTATGGACTTGCTAGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCATGTGTAATTGAACTACCAGAATTGAAGGGTCGTGAACGTTTGAACGGGAAGCCCTTGTATGTGTTGGTGGAATATTTGGATGATTGA 555 0.4523 MSACTDEDPRLHGIRTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVESGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYLDD* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0088 184 CDD PRTases_typeI 48 180 IPR000836 -
Lja2g0088 184 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Lja2g0088 184 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lja2g0088 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 180 - -
Lja2g0088 184 Gene3D - 2 181 IPR029057 -
Lja2g0088 184 TIGRFAM apt: adenine phosphoribosyltransferase 15 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lja2g0088 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 180 - -
Lja2g0088 184 SUPERFAMILY PRTase-like 13 175 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0088 Lja-Chr2 668949 674079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0088 7 180 PRT Gene Family AT1G27450 76.437 6.48e-96 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0088 K00759 - gmx:100306411 349.747