Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0077 ATGGCAGCTAGACTAGGGCTTTCATTGCTGCTCCTCACAAACTTTGTCATTTACATGGCTGGCACCGCAGAATCTGCAATTACAAGGCAAGCCAACACTAACCCAGCAGAGTTCATCAAGTCCTCATGCAGAACCACTCGCTACCCTGTTCTATGTGTTCAGAGTCTGATAGGGTACGCTAGCGTGATTGGCCACAGCGAGCGACAACTAGCCATGACCGCTTTATCGGTGAGCATATCCAGGACACGATCGAGCGCATCTTTTGTGAAGAAAATATCCCAGGCAAGGGGACTCAAGCCCAGGGAGTACAGAGCCGTGCAAGACTGCATAGAAACCATAGGTGACAGTGTGGACCGTCTTAGCCAATCGGTTCGGGAGCTTGACCGTACGGGAAAGGCCTCGGGGGAGGACTTCGTGTGGCACATGAGCAACGTGCAAACTTGGGTTAGTTCTGCCCTCACCGATGATGACACTTGTCTTGATGGCTTTGCTGGTCCTGCCATGGATGGAAACGTCAAGGCTGACATCAAGGACAGGGTTCTCCTTGTTGCTCAAGTCACCAGCAATGGACTCGCTTTGGTTAATCACTTTGCCTCAAGGCACCAACACGCCGAAACTCCTTAG 624 0.5176 MAARLGLSLLLLTNFVIYMAGTAESAITRQANTNPAEFIKSSCRTTRYPVLCVQSLIGYASVIGHSERQLAMTALSVSISRTRSSASFVKKISQARGLKPREYRAVQDCIETIGDSVDRLSQSVRELDRTGKASGEDFVWHMSNVQTWVSSALTDDDTCLDGFAGPAMDGNVKADIKDRVLLVAQVTSNGLALVNHFASRHQHAETP* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0077 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 197 IPR035513 -
Lja2g0077 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 201 - -
Lja2g0077 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 197 IPR035513 -
Lja2g0077 207 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 196 IPR006501 GO:0004857
Lja2g0077 207 SMART PMEI_2 34 193 IPR006501 GO:0004857
Lja2g0077 207 CDD PMEI-like_3 41 199 - -
Lja2g0077 207 PANTHER PECTINESTERASE INHIBITOR 9 21 201 - -
Lja2g0077 207 Pfam Plant invertase/pectin methylesterase inhibitor 38 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0077 Lja-Chr2 584587 585405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0077 20 197 Carbohydrate Esterase AT3G14310 30.939 7.43e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0077 - - mtr:MTR_5g012000 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0077 2 584587 585405 Lja2g0077 2 584587 585405 ECH