Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0043 ATGGAGAAAACCAAGTATGGGATGGAGCTTGTATTGCTTCTTGGCCTCATTTCCATGCTCAGCTTCATTCCAGCTTCAATTGCTGCACAGGAAGGCCAAGAGCATGACAATTTAACAACCTACATTGTTCATGTAAAAAAGCTAGAGATTGAAGGTCCTCTTCAATCCACAGAAGAGTTGCATACCTGGCACCACTCGTTCCTGCCAGAAACCTCCAACAAGGACCGAATGGTTTTCTCATACCGCAATGTAGCCTCTGGATTTGCTGTGAGATTGACCCCAGAAGAAGCCAATGCTCTGCAAGAGAAGGAGGAAGTTATGTCAATCCGTCCTGAGAGGACTCTTTCACTGCACACAACTCACACTCCAAGCTTCTTGGGTTTGAGACAAGGACAAGGACTGTGGAATGATTCCAACCTTGGCAAAGGTGTCATAATTGGAGTCATAGACACAGGCATATACCCTTTCCATTTATCCTTCAATGATGAAGGAATGCCACCTCCACCTGCGAAATGGAAAGGTTACTGTGAATTCACAGGGGGCAAAGTGTGCAACAACAAGCTCATCGGTGCGAGAAATCTAGTGAAAAGCGCAATCCAAGAGCCTCCTTATGAAGATTTCTTCCACGGAACCCACACAGCCGCAGAGGCTGCTGGAAGGTTCGTTGAGGGTGCAAGTGTTTTTGGCAATGCTCGTGGCATAGCATCTGGCTCTCTCCCATTTTTTGAAGACCCAATTGCAATTGGGGCCTTTACCGCCATTCAGAAAGGAATCTTTGTGAGTTGCTCAGCTGCAAATGGTGGCCCTCACTACAGCACTCTCTCAAACGAGGCCCCATGGATTCTCACAGTTGGTGCAAGCACCATTGACAGAAAGATTTCAGCATCTGCAAAGCTTGGAAACGGCGCAGAATATGAAGGGCAAACACTGTTCCAACCCAGGGACTTTTCTCCTCAATTGTTACCACTTGTATATGCAGCTGCAACAGGAAACAATACCTCTGTATTTTGTGGTCCAGGATCCTTAAAGAACATTGATGTCAAGGGAAAGGTGGTGCTGTGTGACGTTGGTGTAGCCGTAGGCATTTCACCTATTGGACAAGGACAAGAAGTTCTAAATGCAGGTGGTTCTGCCATGATTGTTGCTAACACAGAAAACTTAGACTTCACTACCTTCGCTACTGCACATGTTCTGCCTGCTGCGCCTGTGAGTTATGCTGCTGGTTTGGCCATCAAAGCATACATAAACTCAACCTACACACCAACCGCAACAGTTTTATTCGAAGGAACCATAATTGGTGACTCTCTAGCTCCTTCTGTTGCTGCATTTTCTTCCAGGGGTCCAAGCCAACAAAGCCCAGGGATTCTAAAACCTGACATTATTGGGCCTGGGTCAGCAATCATGACAACTGCTAACACAGTTAACCTTGGAGGCTTGCCCATACTTGATCAAAGGCTTCAACCTGCTGACATATTTTCCACTGGTGCTGGCCATGTTAACCCAGTAAGAGCAAATGATCCAGGGCTTATTTATGATATCCAGCCTGAGGATTACGTTTCTTACTTGTGTGGTTTGGGTTACTCAGACAGAGAAGTTGCAATCATTGTGCAAAGGAGTGTGAGATGTTTCAATGTGATAAGCATAGCACAAGCAGAACTCAATTACCCCTCGTTTTCTATTCTGTTGGGGTCTGATTCACAGTTGTACACTAGAACGTTGACAAATGTTGGGCTTGCTAACTCAACTTACACTGTGAAAATTGATTTGCCTTTGGCCATAGGTATCAGCGTGAATCCTAGTCAGATCACGTTCACGGAGGTCAACCAGAAGGTTACATACTGGGTGGATTTTATCCCACAAATCAAAGAAAATAGAGGCAACCATACTTTTGCTCAGGGTGCTATCACGTGGGTGTCTGATAAATACGCTGTTAGGACCCCAATCTCTGTCATTTTCAAGTGA 1962 0.4557 MEKTKYGMELVLLLGLISMLSFIPASIAAQEGQEHDNLTTYIVHVKKLEIEGPLQSTEELHTWHHSFLPETSNKDRMVFSYRNVASGFAVRLTPEEANALQEKEEVMSIRPERTLSLHTTHTPSFLGLRQGQGLWNDSNLGKGVIIGVIDTGIYPFHLSFNDEGMPPPPAKWKGYCEFTGGKVCNNKLIGARNLVKSAIQEPPYEDFFHGTHTAAEAAGRFVEGASVFGNARGIASGSLPFFEDPIAIGAFTAIQKGIFVSCSAANGGPHYSTLSNEAPWILTVGASTIDRKISASAKLGNGAEYEGQTLFQPRDFSPQLLPLVYAAATGNNTSVFCGPGSLKNIDVKGKVVLCDVGVAVGISPIGQGQEVLNAGGSAMIVANTENLDFTTFATAHVLPAAPVSYAAGLAIKAYINSTYTPTATVLFEGTIIGDSLAPSVAAFSSRGPSQQSPGILKPDIIGPGSAIMTTANTVNLGGLPILDQRLQPADIFSTGAGHVNPVRANDPGLIYDIQPEDYVSYLCGLGYSDREVAIIVQRSVRCFNVISIAQAELNYPSFSILLGSDSQLYTRTLTNVGLANSTYTVKIDLPLAIGISVNPSQITFTEVNQKVTYWVDFIPQIKENRGNHTFAQGAITWVSDKYAVRTPISVIFK* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0043 653 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 465 652 - -
Lja2g0043 653 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 237 465 IPR045051 -
Lja2g0043 653 CDD PA_subtilisin_like 298 425 - -
Lja2g0043 653 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 146 157 IPR023827 -
Lja2g0043 653 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Lja2g0043 653 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lja2g0043 653 Gene3D - 290 432 - -
Lja2g0043 653 Gene3D - 522 652 - -
Lja2g0043 653 SUPERFAMILY Subtilisin-like 117 509 IPR036852 GO:0004252|GO:0006508
Lja2g0043 653 Pfam Subtilase family 141 472 IPR000209 GO:0006508|GO:0008236
Lja2g0043 653 Gene3D Peptidase S8/S53 domain 240 465 IPR036852 GO:0004252|GO:0006508
Lja2g0043 653 Pfam Peptidase inhibitor I9 40 118 IPR010259 -
Lja2g0043 653 Pfam Fibronectin type-III domain 552 650 IPR041469 -
Lja2g0043 653 Gene3D Peptidase S8/S53 domain 143 239 IPR036852 GO:0004252|GO:0006508
Lja2g0043 653 Gene3D Peptidase S8/S53 domain 466 518 IPR036852 GO:0004252|GO:0006508
Lja2g0043 653 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 118 IPR037045 -
Lja2g0043 653 Pfam PA domain 322 411 IPR003137 -
Lja2g0043 653 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 239 IPR045051 -
Lja2g0043 653 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 465 652 IPR045051 -
Lja2g0043 653 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 237 465 - -
Lja2g0043 653 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 25 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0043 Lja-Chr2 356320 358534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0043 40 650 Subtilisin-like Serine Gene Family AT5G67360 36.054 6.45e-133 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0043 - - lja:Lj2g3v2002900.1 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0043 2 356320 358534 Lja2g0043 2 356320 358534 ECH