Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0042 ATGGAGCAAACCAAGTATAGGATGGAGCTTGTATTGCTTCTTGGCCTCATTTCCATGCTCAGCTTCATTCCAGCTTCAATTGCTGCAGAGGAAGGCCAAGAGCATGACAACTTAACAACCTACATTGTTCATGTAAAAAAGCTAGAGATTGAAGGTCCTCTTCAATCCACAGAAGAGTTGCATACCTGGCACCACTCATTCTTGCCAGAAACCTCCAACAAGGACAGAATGGTTTTCTCTTACCGCAACGTAGCCTCAGGATTTGCGGTGAGATTGACCCCAGAAGAAGCCAATGCTCTGCAAGAGAAGGAGGAAGTTATGTCAATCCGTCCCGAGAGGACTCTTTCACTGCACACAACTCACACTCCAAGCTTCTTGGGTTTGAGACAAGGACAAGGACTGTGGAATGATTCCAACCTTGGCAAAGGTGTTATAATTGGAGTCATAGACACAGGCATATACCCTTTTCACTTATCCTTCAATGATGAAGGAATGCCGCCTCCACCTGCAAAATGGAAAGGCCATTGTGAATTCACAGGGGGCTCAGTGTGCAACAACAAGCTCATTGGTGCGAGAAATCTAGTCAAAAGCGCAATCCAAGAGCCTCCTTATGAAGATTTCTTCCATGGAACTCACACTGCCGCAGAGGCTGCTGGCAGATTTGTTGAGGGTGCAAGTGTTTTTGGCAATGCTCGTGGCACAGCAGCTGGTATGGCACCCGATGCTCATTTAGCAATATACAAAGTTTGCAGCAGCAAAGTGAAAGATGAATGCCCTGAAAGTGCTATCTTAGCTGCTATGGACATAGCCATTGAGGATGGTGTGGATGTTCTTTCCCTCTCTCTCGGTTTAGGCTCTCTCCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTCGCCGCAACTCAAAAAGGAATCTTTGTTAGTTGTTCTGCTGCAAATTCTGGCCCTCACTACAGCTCTCTGTCAAACGAGGCGCCGTGGATTCTCACAGTGGGAGCAAGCACCATTGATAGAAAAATCTCAGCATCAGCAAAGCTTGGAAACGGTGCAGAATATGAAGGGGAAACATTGTTCCAACCCAAGGACTTTTCTTCTCAATTGTTACCACTCGTGTATGCTGCTGCTGAAAAAAACAACTCCTCTGCCTTATGTGCACCAGGATCCTTACGGAACATCAATGTCAAGGGAAAGGTGGTGGTGTGTGACCTTGGTGGAGGAATCCCATTTATTGCAAAAGGTCAAGAAGTTCTAGATGCAGGTGGTTCTGCCATGATACTTGCTAACATAGAAAACTTCGGCTTCACTACCTTGGCCAATGCTCATGTTCTCCCAGCTGTGCATGTCAGTTATGCTGCTAGCTTAGCTATCAAAGCTTACATAAACTCAACCTACACACCAACCGCAACAGTTTTATTCCAAGGAACCATAATTGGTGACTCTCTAGCTCCTTCTGTTGCTGCATTTTCTTCCAGGGGTCCAAGCCAGCAAAGCCCAGGGATTCTAAAACCTGACATCATTGGTCCGGGAGTGAACATTCTTGCTGCATGGGCTGTGTCTGTGGACAACAAGATCCCAGCTTTTGACATAATTTCAGGCACTTCAATGTCATGTCCTCACCTCAGCGGCATTGCTGCGCTGCTAAAAAGCGCTCACCCTGATTGGTCCCCGGCTGCTATCAAATCAGCAATCATGACAACTGCTAACACACTTAACCTTAGAGGCTTGCCCATACTTGATCAAAGGCTTCAACCTGCTGACATATTTGCCACTGGTGCTGGCCATGTTAACCCAGTAAGAGCAAATGATCCAGGGCTTGTTTACGATATCCAGCCAGAGGATTATGTTCCTTACTTGTGTGGTTTGGGTTACTCAGACAGAGAAGTTACAATCATTGTGCAAAGGAGTGTGAGATGTTTCAATGTGAAAAGCATAGCACAAGCAGAACTCAATTACCCCTCATTTTCTATTCTGTTGGGGTCTGATTCACAGTTCTACACCAGAACGTTGACAAATGTTGGACCTGCTAACTCAACTTACACTGTGAAAATTGATGTGCCTTTGGCCATGGGTATCAGCGTGAGTCCTAGTCAGATCACCTTCACGCAGGTGAACCAGAAGGTTGCATACTTTGTGGATTTTATCCCACAAATCAAAGAAAATAGAGGCAACCATACTTTTGCTCAGGGTGCTATCACGTGGGTGTCTGATAAACACGTTGTTAGGACCCCAATCTCTGTCATTTTCAAGTGA 2253 0.4576 MEQTKYRMELVLLLGLISMLSFIPASIAAEEGQEHDNLTTYIVHVKKLEIEGPLQSTEELHTWHHSFLPETSNKDRMVFSYRNVASGFAVRLTPEEANALQEKEEVMSIRPERTLSLHTTHTPSFLGLRQGQGLWNDSNLGKGVIIGVIDTGIYPFHLSFNDEGMPPPPAKWKGHCEFTGGSVCNNKLIGARNLVKSAIQEPPYEDFFHGTHTAAEAAGRFVEGASVFGNARGTAAGMAPDAHLAIYKVCSSKVKDECPESAILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQKGIFVSCSAANSGPHYSSLSNEAPWILTVGASTIDRKISASAKLGNGAEYEGETLFQPKDFSSQLLPLVYAAAEKNNSSALCAPGSLRNINVKGKVVVCDLGGGIPFIAKGQEVLDAGGSAMILANIENFGFTTLANAHVLPAVHVSYAASLAIKAYINSTYTPTATVLFQGTIIGDSLAPSVAAFSSRGPSQQSPGILKPDIIGPGVNILAAWAVSVDNKIPAFDIISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTANTLNLRGLPILDQRLQPADIFATGAGHVNPVRANDPGLVYDIQPEDYVPYLCGLGYSDREVTIIVQRSVRCFNVKSIAQAELNYPSFSILLGSDSQFYTRTLTNVGPANSTYTVKIDVPLAMGISVSPSQITFTQVNQKVAYFVDFIPQIKENRGNHTFAQGAITWVSDKHVVRTPISVIFK* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0042 750 CDD Peptidases_S8_3 117 569 IPR034197 -
Lja2g0042 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 118 IPR037045 -
Lja2g0042 750 SUPERFAMILY Subtilisin-like 117 606 IPR036852 GO:0004252|GO:0006508
Lja2g0042 750 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 146 157 IPR023827 -
Lja2g0042 750 Gene3D Peptidase S8/S53 domain 143 615 IPR036852 GO:0004252|GO:0006508
Lja2g0042 750 Pfam Subtilase family 141 572 IPR000209 GO:0006508|GO:0008236
Lja2g0042 750 CDD PA_subtilisin_like 346 471 - -
Lja2g0042 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 749 IPR045051 -
Lja2g0042 750 Gene3D - 338 478 - -
Lja2g0042 750 Pfam Peptidase inhibitor I9 40 118 IPR010259 -
Lja2g0042 750 Pfam PA domain 370 456 IPR003137 -
Lja2g0042 750 Gene3D - 619 749 - -
Lja2g0042 750 ProSiteProfiles Serine proteases, subtilase domain profile. 125 602 - -
Lja2g0042 750 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 25 749 - -
Lja2g0042 750 Pfam Fibronectin type-III domain 649 747 IPR041469 -
Lja2g0042 750 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lja2g0042 750 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Lja2g0042 750 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0042 Lja-Chr2 350097 352349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0042 40 747 Subtilisin-like Serine Gene Family AT5G67360 45.652 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0042 - - gmx:100783595 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0042 2 350097 352349 Lja2g0042 2 350097 352349 ECH