Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0041 ATGACCAAGGTGGTCCAATTTTCTTTGCTTCTTGCTCTCATTTTAGTCCTTAGTGTCTCTCTAGCTTCAGCAGCATCCCAAAATCTTGAATTCACAGAACTAGAAGATGAAGATCAAAGCAACTTGTCGACTTACATAGTCCATGTCAGAAAGCCTCAGGTTATTCAATCTGATGATTTGCATACTTTTTACTATTCCCTACTACCAGAGAGCACAAAAACAACGAACCAACGCATTGTCTTCACATACCGAAACGTTGTGAACGGATTTGCTGTGAAACTGACCCCTGAAGAAGCCAAAGCTCTGCAACAGAACGAGGAGGTTGTGTCAGCACGTCCTGAAAAAATTCTATCTCTACACACAACACACACTCCAAGCTTCTTGGGTTTGCAACAAGGATTAGGACTATGGAAAGGTTCCAATTCTGGCAAAGGGGTCATCATTGGAATCTTGGACACAGGGATATCCCCCTTCCACCCTTCTTTTTCAGACGAGGGAATGCCTTCTCCACCTGCAAAATGGAATGGTATCTGTGAATTCACAGGGAAGAGGACTTGTAACAACAAGATCATTGGCGCAAGAAATTTTGTCAAAACAAAAAATCTAACACTTCCATTTGATGACGTTGGTCATGGAACTCACACGGCTAGCACCGCCGCTGGAAGACCAGTGCAGGGTGCTAACGTATACGGCAATGCGAACGGCACCGCAGTTGGCATGGCACCTGATGCACACATAGCAATGTACAAGGTATGTGGCCTGGTGGGTTGTTCTGAGAGTGCAATATTAGCAGGAATGGACACCGCCGTTGACGACGGCGTTGATGTTCTTTCCCTCTCCCTCGGAGGACCCTCTGGTCCTTTCTTTGAAGACCCAATTGCTTTAGGTGCATTTGGGGCAATTCAGAAAGGAATATTTGTTAGTTGTTCTGCTGCTAACTCTGGCCCTGCTTATTCATCTCTGTCCAATGAAGCTCCATGGATTCTCACCGTTGGTGCAAGCAGCATTGATAGAACAATCATGGCAACGGCGAAGCTTGGGAATGGGAAAGAGTATGTTGGGCAATCAGTGTTTCAGCCTAAAGACTTTGCACCTTCATTGTTGCCACTGGTGTATGCAGGTGCAAATGGAAACAATAATTTCTCTGTTTTCTGTGCCCCTGAATCCTTGAACAGATCAGATGTTGAGGGAAAGGTAGTGTTATGCGAGGATGGTGGATTTGTTCCGAGAGTGTTCAAAGGGAAAGCGGTTAAAGATGCTGGTGGTGCAGCAATGATCCTCATGAACAGTGTACTTGAAGACTTCAATCCCATCGCTGATGTTCATGTTCTTCCTGCTGTGCACATAAGTTATGAAGCTGGGTTAGCCCTCAAAGAATACATAAATTCAACTTCAACACCAACAGCTACAATCTTATTTGAAGGAACTGTTATTGGAAACCTACTTGCCCCTCAAGTTACTTCCTTTTCTTCTAGAGGACCAAGCAAAGCAAGCCCAGGGATTCTGAAACCTGACATCATTGGACCAGGATTGAACATTCTAGCTGCATGGCCTGTGTCTTTGGATAACAGTACCACCCCACCATTCAACATCATTTCAGGTACCTCAATGTCTTGTCCTCATCTCAGTGGCATTGCGGCTCTGCTGAAAAATTCTCATCCAGATTGGTCCCCTGCTGCAATAAAATCAGCAATCATGACCACTGCTTCTCAGGTGAATCTTGGAGGGACCCCTATATTGGACCAGAGGCTTGTACCTGCAGATGTTTTCGCCACTGGTGCAGGACATGTAAACCCTGTGAAAGCAAACGATCCAGGGCTTGTTTATGACATTGAACCTAATGATTATATTCCTTATTTATGTGGTTTGAATTACACGGACAGAGAAGTTGGAGTGATTTTGCAGCAGAGAGTGAGGTGCTCAGAGGTAAATCACATAGCTGAAGCAGAGCTTAACTATCCGTCATTTTCTATTCTGTTGGGGAACACTACACAGTTATATACAAGAACAGTGGCAAATGTTGGACCTGCGAACTCAACATACACTGCGGAAATTGGTGTTCCTGTGGGAGTAGGTATGAGTCTAAGTCCTGCTCAGTTAACATTCACTGAGGTGGGGCAAAAGCTTACATACTCTGTTTCTTTTATCCCCTTTTCCGAAGACAGAGACAATCACACGTTTGCTCAGGGCTCTCTGAAGTGGGTATCTGGAAAATACTCTGTTAGAAGCCCTATATCTTTTATTTTCCTTTGA 2253 0.4456 MTKVVQFSLLLALILVLSVSLASAASQNLEFTELEDEDQSNLSTYIVHVRKPQVIQSDDLHTFYYSLLPESTKTTNQRIVFTYRNVVNGFAVKLTPEEAKALQQNEEVVSARPEKILSLHTTHTPSFLGLQQGLGLWKGSNSGKGVIIGILDTGISPFHPSFSDEGMPSPPAKWNGICEFTGKRTCNNKIIGARNFVKTKNLTLPFDDVGHGTHTASTAAGRPVQGANVYGNANGTAVGMAPDAHIAMYKVCGLVGCSESAILAGMDTAVDDGVDVLSLSLGGPSGPFFEDPIALGAFGAIQKGIFVSCSAANSGPAYSSLSNEAPWILTVGASSIDRTIMATAKLGNGKEYVGQSVFQPKDFAPSLLPLVYAGANGNNNFSVFCAPESLNRSDVEGKVVLCEDGGFVPRVFKGKAVKDAGGAAMILMNSVLEDFNPIADVHVLPAVHISYEAGLALKEYINSTSTPTATILFEGTVIGNLLAPQVTSFSSRGPSKASPGILKPDIIGPGLNILAAWPVSLDNSTTPPFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTASQVNLGGTPILDQRLVPADVFATGAGHVNPVKANDPGLVYDIEPNDYIPYLCGLNYTDREVGVILQQRVRCSEVNHIAEAELNYPSFSILLGNTTQLYTRTVANVGPANSTYTAEIGVPVGVGMSLSPAQLTFTEVGQKLTYSVSFIPFSEDRDNHTFAQGSLKWVSGKYSVRSPISFIFL* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0041 750 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 148 159 IPR023827 -
Lja2g0041 750 SUPERFAMILY Subtilisin-like 119 607 IPR036852 GO:0004252|GO:0006508
Lja2g0041 750 SUPERFAMILY PA domain 368 464 IPR046450 -
Lja2g0041 750 CDD Peptidases_S8_3 119 570 IPR034197 -
Lja2g0041 750 Gene3D - 337 478 - -
Lja2g0041 750 Pfam Subtilase family 143 572 IPR000209 GO:0006508|GO:0008236
Lja2g0041 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 748 IPR045051 -
Lja2g0041 750 Gene3D Peptidase S8/S53 domain 145 616 IPR036852 GO:0004252|GO:0006508
Lja2g0041 750 CDD PA_subtilisin_like 343 471 - -
Lja2g0041 750 Gene3D - 620 748 - -
Lja2g0041 750 ProSiteProfiles Serine proteases, subtilase domain profile. 127 603 - -
Lja2g0041 750 Pfam Fibronectin type-III domain 650 746 IPR041469 -
Lja2g0041 750 Pfam PA domain 369 457 IPR003137 -
Lja2g0041 750 Pfam Peptidase inhibitor I9 44 120 IPR010259 -
Lja2g0041 750 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 748 - -
Lja2g0041 750 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Lja2g0041 750 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Lja2g0041 750 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Lja2g0041 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 120 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0041 Lja-Chr2 344835 347338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0041 78 746 Subtilisin-like Serine Gene Family AT1G04110 46.296 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0041 - - lja:Lj2g3v2002920.1 1439.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0041 2 344835 347338 Lja2g0041 2 344835 347338 ECH