Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0030 ATGGCTCATTTGGTTTATGATGAAACTCCTTCCTTTGGAGGCTCACACCATCCACTTGGTCAACAAGATGTTCCATTTCCAACCACTTCGAGTTCCTTAAGGATTCTGCGCTTACATGGCAACTTGGACATTTGGATCCATGAGGCCAAAAACCTCCCCAACATGGACATGTTTCACAAGAAAATAGGGGACATGTTTTCCATGTTACCTGGGAAGCTTGGAAGCAAAATTGAAGGTTCTGGAACCAGTGATCCATATGTCACCGTGTCTGTGGGGGGTCCTGTGGTTGCTAGAACTTTTATCATCAGAAACAATGCCAACCCTGTTTGGATGCAGCATTTCAATGTCCCAGTTGCACATTTTGCTGCTGAAGTTCACTTTGTTGTGAAGGACAATGATTATGTGGGCTCACAGCTTATTGGTGCTGTGGGGATTCCAGTGGAACAGTTATATAGTGGTACCAAAATAGAGGGTCTTTTCCCTATCCTTAATGCTAGTGGGAAACCCTGTAAGGCTGGGGCAGTGTTGAGTTTAACCATTCAGTACACTCCTGTTGATAAGGTGGCCCTTTATAGTCATGGAGTAGGTGCTGGTCATGATCTTCAAGGTGTCCCTAATACATACTTTCCCCTTAGAAAAGGCGGCGAAGTTACTCTCTATCAAGATGCTCATGTTGATGAAGGTTGCCTTCCTAGTTTGAAGGTTGATGGAGATGTGAGTTATAAGCATAGAAGTTGTTGGCGTGACATCTTTGATGCAATAAGCCAGGCACGTAGATTAGTGTATATTGTGGGTTGGTCTGTGTACTACAATGTTAGTCTCATTCGGGATGGTAGTGGCGAAAATGCTCGAACTTTAGGTGACCTTCTTAAAGTCAAGTCACAGGAAGGTGTGAGAGTGCTGCTCCTTGTGTGGGATGATCCTACTTCTGGAAGCATGCTTGGGTATAAAACGGTTGGAGTTATGGATACTCATGACGAGGACACTCGCCGCTTCTTCAAGCATTCTTCAGTACGAGTGCTTCTTTGCCCACGAGCTGGTACTAAAGGACATAGCTGGGTCAGACAACCGGAAGCTGGAACAATCTATACCCATCATCAGAAGACAGTCATTGTTGATGCTGATGCAGGTCAGAATAAAAGGAAGATTGTAGCTTTCATCGGAGGTCTTGACTTATGCGCGGGCCGATATGATACGCCAAAACATTCTCTCTTTAGGACTTTGCAGACAACACACAAAGATGACTTTCATAATCCTAACTTTGAGGGGCCTGTTACTGGTTGTCCAAGAGAACCATGGCATGATTTGCACTCCCAAGTTGATGGTCCGGCTGCATATGACATCCTCACCAATTTTGAGGAGCGTTGGTTAAGGGCATTAAAAATGCATAAACTTCAAAAGATAAAAAGTTCACAAGATGATTCATTACTAAAAATTGATAGAATCCCTGACATTGTTGGCATTGATGAATTTCCCAGCCAGAAAGAAAATAACCCAGAGACTTGGCATGTTCAGGTCTTCCGTTCAATCGATTCCAATTCTGTGAAAGGATTTCCTAAGGAACCAAAAGATGCTATAAAAAGGAACTTGGTTTCTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTGAAGGCAATCCGATCCGCGCAAAAGTTCATCTATATTGAGAATCAATACTTTCTTGGCTCATCATATAATTGGGATACTTTCAAAGACCTCGGTGCAAACAACTTAATTCCAATGGAAATTGCGCTTAAAATTGCCAACAAAATTAAACAAAAAGAGAGATTTTCTGTTTACGTAGTCATTCCTATGTGGCCTGAAGGTGTACCCACAGGTGCATCTACTCAGAGGATTCTCTTTTGGCAGTTCAAAACAATGGAAATGATGTATGAAACGATTTACAAGGCCTTACAGGAGGCTGGGCTTGATAATGAGTACGAACCACAAGACTACTTGAATTTCTTTTGCCTTGGTAATCGTGAGCTCCCTGATAATGGAAACATTGCAAGTGCTGCAAATCCTACTGGACAAAAGACTCCTCAGGCACTCGCTCAAAAGAACCGGAGATTCATGATTTATGTTCATTCAAAGGGAATGGTAGTGGATGATGAGTATGTGTTAATGGGTTCTGCAAACATAAACCAGCGATCCATGGAAGGCACCAGAGACACTGAGATTGCAATGGGAGCATATCAGCCTAAACATACTTGGGCAAGCAAGCTATCTAAACCTCGTGGCCAGGTGCATGGTTATAGAATGTCATTGTGGAGCGAACATATAGGTGCTGTGGAAGAATGTTTCCATCGACCAGAGAGCCTTGAATGTGTAAGGCGTATCAGGTCATTGAGTGAGCATAACTGGAGACAGTATGTAGCTGATGAAGTTACTGAAATGAAAGGCCATCTCTTGAAATACCCTCTTGAAGTTGATTCAAAGGGCAAGGTGAAAACTCTTCCTGGCTGTGAGACATTCCCTGATGTTGGAGGAAGCATAAAGGGGACATTTATAAAAGTCAAAGAAAACCTCACCATCTGA 2550 0.4278 MAHLVYDETPSFGGSHHPLGQQDVPFPTTSSSLRILRLHGNLDIWIHEAKNLPNMDMFHKKIGDMFSMLPGKLGSKIEGSGTSDPYVTVSVGGPVVARTFIIRNNANPVWMQHFNVPVAHFAAEVHFVVKDNDYVGSQLIGAVGIPVEQLYSGTKIEGLFPILNASGKPCKAGAVLSLTIQYTPVDKVALYSHGVGAGHDLQGVPNTYFPLRKGGEVTLYQDAHVDEGCLPSLKVDGDVSYKHRSCWRDIFDAISQARRLVYIVGWSVYYNVSLIRDGSGENARTLGDLLKVKSQEGVRVLLLVWDDPTSGSMLGYKTVGVMDTHDEDTRRFFKHSSVRVLLCPRAGTKGHSWVRQPEAGTIYTHHQKTVIVDADAGQNKRKIVAFIGGLDLCAGRYDTPKHSLFRTLQTTHKDDFHNPNFEGPVTGCPREPWHDLHSQVDGPAAYDILTNFEERWLRALKMHKLQKIKSSQDDSLLKIDRIPDIVGIDEFPSQKENNPETWHVQVFRSIDSNSVKGFPKEPKDAIKRNLVSGKNVMIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDTFKDLGANNLIPMEIALKIANKIKQKERFSVYVVIPMWPEGVPTGASTQRILFWQFKTMEMMYETIYKALQEAGLDNEYEPQDYLNFFCLGNRELPDNGNIASAANPTGQKTPQALAQKNRRFMIYVHSKGMVVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPKHTWASKLSKPRGQVHGYRMSLWSEHIGAVEECFHRPESLECVRRIRSLSEHNWRQYVADEVTEMKGHLLKYPLEVDSKGKVKTLPGCETFPDVGGSIKGTFIKVKENLTI* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0030 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 361 396 IPR001736 GO:0003824
Lja2g0030 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Lja2g0030 849 PANTHER PHOSPHOLIPASE D 8 849 IPR015679 -
Lja2g0030 849 Gene3D Endonuclease Chain A 233 481 - -
Lja2g0030 849 Pfam Phospholipase D C terminal 769 839 IPR024632 -
Lja2g0030 849 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 849 - -
Lja2g0030 849 SUPERFAMILY Phospholipase D/nuclease 528 780 - -
Lja2g0030 849 Pfam C2 domain 40 162 IPR000008 -
Lja2g0030 849 SUPERFAMILY Phospholipase D/nuclease 203 461 - -
Lja2g0030 849 PIRSF PLD_plant 27 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lja2g0030 849 SMART pld_4 695 722 IPR001736 GO:0003824
Lja2g0030 849 SMART pld_4 361 396 IPR001736 GO:0003824
Lja2g0030 849 ProSiteProfiles C2 domain profile. 23 160 IPR000008 -
Lja2g0030 849 SMART C2_3c 41 159 IPR000008 -
Lja2g0030 849 Gene3D Endonuclease Chain A 500 749 - -
Lja2g0030 849 CDD C2_plant_PLD 38 183 - -
Lja2g0030 849 Gene3D C2 domain 26 183 IPR035892 -
Lja2g0030 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 185 IPR035892 -
Lja2g0030 849 Pfam PLD-like domain 548 731 IPR025202 -
Lja2g0030 849 Pfam Phospholipase D Active site motif 362 396 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0030 Lja-Chr2 262968 273385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0030 32 849 Phospholipase D Gene Family (Wang group) AT2G42010 69.431 0.0 1267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0030 K01115 - gmx:100786241 1479.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0030 2 262968 273385 Lja2g0030 2 262968 273385 ECH