LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g6036	ATGAAAACTGCATCATCATCATCATCACTGCTCGCATTGTTGCTAATTTCCTCTTTCGTTCATGTGTTTCAGGCTCAAGCTCCAGAGGCTCTTCCTCCAGCAGCAGAAACCTGCAACGGCGTTTTCATTTCCTACGACTTCCTCAACCGCAGGAAGGAATTCCCTCGCGTCAAGAACGCCACCGCACAAGCCTGGGCCTTCAACTCCACCGCCACCGTCCTCAACGCCGGCACTCATGTCATCAAAGCGTGGAAACTCTTCATCGGTTTCCAACACCGCGAGATTCTAGTCTCTGCCGCTGGAGCCACCATGTTCGACGCTTTCGAGCTTCCTGCTCCCGTCGGTAACGGAACTACCTTCGTTGGAGGTTCTACGCCTGATTTAGAAACCTCCATCAACACAGCCATGGATTTGACACAAATTCAAGTGCAGATTCAACTCTCTGGCACCCAGTTTGGGCTTAAGCCCCCTGCAGCTCCCATGCCTAAAACCATCAAGTTGGTCAATGATGGATACAAGTGCCCCCAACCAAGTCTTCGCAAGAGATCCATGTGGGCATGTTGTAAAAAAGACCCCAAATTCAAGTCTCCGCTTAAGAAGACCAAGTTCTTGAAGCGCCAGAAAGGGGACCTGACCATATCCTATGATGTTCTTCAAGTGTATGACAACAACTACCTTGTTCAAGTGACCATGGAGAATCACAGCCCTCTGGGACGCTTGGATCGTTGGAACTTAACATGGGAGTGGGCAAGAGGCGAATTCATATCTAGCATGAAAGGCGCTTTCACGCGTGAAATAGACTACTCGGGTTGCGTCAACGGCCCTGCAGGTCAGTACTACAAGGACATGGATTTCTCCAAAGTCCTCAACTGTCAGAAGAATCCAGTGATCAGTGACTTGCCTCCAGAGAAATACAACGATACTGAGATTGGAAAAATACCCAATTGCTGCAGAAACGGCTCAATTTTACCCACCATCATGGATCAAACACAATCCAAGTCTGTTTTCCAAATGCAGGTGTTTAAAATTCCACCTGACATGAACAAAACAGCTATTTTCCCTCCAGAGAAGTGGAAAATAATGGGTGTCCTTAACCCGGATTACAAATGTGGACCACCTCTCAAAGTGGAACCTGCTAGATTTCCTGATCCTAAAGGACTTGATGCTTCTGTTATCACAGTTTCAAGCTGGCAAATTGTCTGCAACATTACAAAACCAACCAAGCGAAATGCTCGCTGCTGTGTCTCTTTCTCTGCCTACTACAATGAGTCTGTTGTCCCGTGCAACACGTGTGCTTGTGGGTGTGACGACACTGATCACTGTAACCCGGACGCCAGAGCAATGCTTTTGCCGTCGGAAGCATTGCTCGTGCCGTTCGAGAACAGGTCAGTTAAGACAGTTGCTTGGGCTAGATTAAAGCATTTTCGCTTCCCGAGAAAGTTACCGTGCGGTGACAATTGTGGAGTTAGCATAAACTGGCATGTGGCTTCAGATTACAAAGGTGGGTGGAGTGCTAGAATCACGTTGTTCAATTGGAAGCCTGACCCTTTTAAGAACTGGTTCACTGCACTGCAGTTCAAGAAGGCAGCTCTGGGTTATGATAAAGTGTATTCCTTCAATGGAACATTCCTACCACGGATGAACCACACTATTTTCCTGCAAGGAATGCAAGGAACCAGCTATTTGATTGGTCAAGACAATGGAACGAATCCAAAAGTGCCAGGGAAACAGCAATCTGTTATTTCCTTTTCTAAGAAACACACACCTGGTATCCACATAGCAAAAGGTGATGGGTTTCCTTCAAAGGTAATATTTAATGGAGAAGAGTGTTCAATTCCAATCCAATTCCCTGTGGGAAGTGGAAGCCAGCATAATGTAGATTTAGTACAAAAATATTTAGTCTTGGTTTTAGTAGTGTTTACAATCAATCACATATTGCATTAG	1944	0.4614	MKTASSSSSLLALLLISSFVHVFQAQAPEALPPAAETCNGVFISYDFLNRRKEFPRVKNATAQAWAFNSTATVLNAGTHVIKAWKLFIGFQHREILVSAAGATMFDAFELPAPVGNGTTFVGGSTPDLETSINTAMDLTQIQVQIQLSGTQFGLKPPAAPMPKTIKLVNDGYKCPQPSLRKRSMWACCKKDPKFKSPLKKTKFLKRQKGDLTISYDVLQVYDNNYLVQVTMENHSPLGRLDRWNLTWEWARGEFISSMKGAFTREIDYSGCVNGPAGQYYKDMDFSKVLNCQKNPVISDLPPEKYNDTEIGKIPNCCRNGSILPTIMDQTQSKSVFQMQVFKIPPDMNKTAIFPPEKWKIMGVLNPDYKCGPPLKVEPARFPDPKGLDASVITVSSWQIVCNITKPTKRNARCCVSFSAYYNESVVPCNTCACGCDDTDHCNPDARAMLLPSEALLVPFENRSVKTVAWARLKHFRFPRKLPCGDNCGVSINWHVASDYKGGWSARITLFNWKPDPFKNWFTALQFKKAALGYDKVYSFNGTFLPRMNHTIFLQGMQGTSYLIGQDNGTNPKVPGKQQSVISFSKKHTPGIHIAKGDGFPSKVIFNGEECSIPIQFPVGSGSQHNVDLVQKYLVLVLVVFTINHILH*	648

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g6036	647	Pfam	COBRA-like protein	225	404	IPR006918	GO:0010215\|GO:0031225
	Lja1g6036	647	PANTHER	COBRA-LIKE PROTEIN 7	5	640	-	-
	Lja1g6036	647	PANTHER	COBRA-LIKE PROTEIN 7	5	640	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja1g6036	Lja-Chr1	111292050	111294249	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja1g6036	32	642	COBRA Gene Family	AT3G20580	56.704	0.0	746

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g6036	-		-	mtr:MTR_5g005590	1003.82