Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g6025 ATGGCTATTCGTTTGTCTAGTGCATTGAGTGCTAAACGCATTCTCCGCGGATCCAGTCTTTTTACAAATCAAGCTGCTGCTAGTACATCACTGGATGTGCCTAAAGGGTACTTTGCTGTGTATGTAGGAGAGAGTGAAAAGAAGAGATTTGTGATTCCAGTGTCATTGTTGATTCAACCCTCATTTCAAGAACTGCTAAGTATAGCAGAGGAAGAATTCGGCTTCAGTCATCCAATGGGTGGCCTCATAATTCCCTGCACAGAAGACATTTTTGTTGAAGTCACCTCAGGCCTACACAGACTATGA 306 0.4314 MAIRLSSALSAKRILRGSSLFTNQAAASTSLDVPKGYFAVYVGESEKKRFVIPVSLLIQPSFQELLSIAEEEFGFSHPMGGLIIPCTEDIFVEVTSGLHRL* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g6025 101 Pfam Auxin responsive protein 12 96 IPR003676 GO:0009733
Lja1g6025 101 PANTHER - 28 98 - -
Lja1g6025 101 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g6025 Lja-Chr1 111197382 111198638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g6025 7 91 Calmodulin-binding Proteins AT3G43120 42.697 7.71e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g6025 K14488 - aprc:113865304 167.933