Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g6013 ATGGATGTTAGCCCTTATGCCAAGAGGGTTGAATTAGCCCTTGAACTCAAGGGGGTACCCTACGAGTATGTGGAAGAAGACTTGGTAAACAAAAGTGAGTTACTTATCAAGCACAACCCTGTTCACAAGAAGGTTCCAGTTCTTGTTCATAATGGGAAGGCTATAGCTGAATCCCTTGTGATCCTAGAATATATTGACGAAACATGGAAAAATAGTCCGAAGCTGCTTCCTGATGATCCTTATAAGAGAGCCCAAGTGCGCTTCTGGTCTAAATTCATCCAGGAACAGATATTAGAGAGCACATTTCAAGTACTCAAAACTAAGGGAGAAGCGCAACGGAAAGCCGTTGATGAAGTGTACGAAAAATTGTATGTGCTCGAAAACGGAATGAAGGCGTTTTTCACAGACGGCAGCAATCCTGGCTTTGAGGAAAACAATGCTGGAATCCTAGACGTGGTGTTTTGTTCGTTATTTGGGGCATACAAGGCTCAGGAGGAAGTTCTCGGTCTGCAATTCATAGTGCCGGATAAATTTCCCGTGTTGTATTCTTGGCTGATCACCATTGTTGAGCTCGAAGCAGTGAAAAAGGTTGCTCCTCCACATGATAAAACAGTGGGTATTCTTCAACATTTTAGGCGCTATGCACTAAAATCTTCCACCGCAACCTGA 669 0.435 MDVSPYAKRVELALELKGVPYEYVEEDLVNKSELLIKHNPVHKKVPVLVHNGKAIAESLVILEYIDETWKNSPKLLPDDPYKRAQVRFWSKFIQEQILESTFQVLKTKGEAQRKAVDEVYEKLYVLENGMKAFFTDGSNPGFEENNAGILDVVFCSLFGAYKAQEEVLGLQFIVPDKFPVLYSWLITIVELEAVKKVAPPHDKTVGILQHFRRYALKSSTAT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g6013 222 SUPERFAMILY Thioredoxin-like 2 96 IPR036249 -
Lja1g6013 222 Gene3D Glutaredoxin 1 75 - -
Lja1g6013 222 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Lja1g6013 222 Pfam Glutathione S-transferase, N-terminal domain 1 70 IPR004045 -
Lja1g6013 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 218 IPR045073 -
Lja1g6013 222 SFLD Main (cytGST) 2 218 - -
Lja1g6013 222 CDD GST_C_Tau 80 211 IPR045074 GO:0004364|GO:0006749
Lja1g6013 222 PANTHER GLUTATHIONE S-TRANSFERASE U9-LIKE 3 218 - -
Lja1g6013 222 SUPERFAMILY GST C-terminal domain-like 67 213 IPR036282 -
Lja1g6013 222 CDD GST_N_Tau 3 69 - -
Lja1g6013 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 73 IPR004045 -
Lja1g6013 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 79 214 IPR010987 -
Lja1g6013 222 Gene3D - 76 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g6013 Lja-Chr1 111038322 111040031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g6013 3 220 Glutathione S-transferase Gene Family AT1G74590 49.772 1.77e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g6013 K00799 - gmx:547581 327.791