Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g6006 ATGTGCGTCCACAAAACCTTATTCGCCACAATCTCTCTCCCACAACCTCGCAATCCTCAAACATCGATCATTCATCTTCCACGTTCGTTTCTCGATCAATCGATGGGAAGCGAAGGCGATGACAACAACAACAGGGTGGTGAAGAAGCCAAGGTTCCTGTGCCTTCATGGGTTCCGAACAAGTGCAGAGATACTCAACAAACAGATACATAAATGGCCTCAATCCGTTCTAGAAAAACTCGATCTCGTTTTCGTCGATGCCCCTTTTCCTTGCAATGGAAAATCTGATGTTGAAGGCATTTTCGATCCTCCTTACTACGAGTGGTTCCAGTTTAACAAGGAATTTACAGAGTATACTAACTTTGATGAGTGCCTGCAATTTATTGAGGATTACATGATCAAGCATGGGCCATTTGATGGTCTACTTGGCTTCTCACAGGGGGCTATACTATCAGCTGCACTGCCAGGTCTTCAGGAGAAGGGCGTGGCACTTACAAAGGTTCCTAAACTGAAATATCTGATAATAATAGGAGGAGCTAAGTTGAGGTCACCTTCAGTGGTGGACAAAGCATATTCTTCCCCCATTCGATGTCCCTCCCTTCACTTTCTAGGAGAGACAGATTTTTTGAGGCAGTATGGTAATGAGCTATTAGAATCCTGTGTCGAACCTGTGGTGATTCATCACCCAAAAGGACACACAATACCAAGATTAGATGATAAGAGCTTGAAGATCATGATGAATTTCATCGAAAAAATTCAAAAAGATACCTAA 771 0.4306 MCVHKTLFATISLPQPRNPQTSIIHLPRSFLDQSMGSEGDDNNNRVVKKPRFLCLHGFRTSAEILNKQIHKWPQSVLEKLDLVFVDAPFPCNGKSDVEGIFDPPYYEWFQFNKEFTEYTNFDECLQFIEDYMIKHGPFDGLLGFSQGAILSAALPGLQEKGVALTKVPKLKYLIIIGGAKLRSPSVVDKAYSSPIRCPSLHFLGETDFLRQYGNELLESCVEPVVIHHPKGHTIPRLDDKSLKIMMNFIEKIQKDT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g6006 256 SUPERFAMILY alpha/beta-Hydrolases 49 235 IPR029058 -
Lja1g6006 256 Pfam Serine hydrolase (FSH1) 48 239 IPR005645 -
Lja1g6006 256 Gene3D alpha/beta hydrolase 45 255 IPR029058 -
Lja1g6006 256 PANTHER ESTERASE OVCA2 46 255 - -
Lja1g6006 256 PANTHER DIHYDROFOLATE REDUCTASE 46 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g6006 Lja-Chr1 110896568 110901159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g6006 37 235 Sulfurtransferasese or Rhodanese AT1G09280 29.004 2.17e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g6006 - - lja:Lj1g3v0244710.1 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g6006 1 110896568 110901159 Lja1g6006 1 110896568 110901159 ECH