Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g6002 | ATGAGAAGGTTCACGTGGCTAACGCCGTTCCGGCGCCACTTGCTTTCCTCTCTTTCCTCAGAACCTATCGTCGTCGATAAAGGAGATTCGTTGCGCAAATTGTTGACCTCTCGCCAATCGCTGCTTCTCGCACGAGCTTTGGGAAATTGCAGTTTTGTCACGAAAATGGAGGATTCTTTATCGTCGAGAATGCCGTTGAGATTTCGTCATATTTATGCTGCAGCATATTCTTCTTCGGCTGAACGAGATTATTATCGGACTCTTGGTGTTTCTGAAAGTGCCAGTCAGGACGAGATAAAAAAGGCATTTCACTCGCTCGCTAAAAAGTATCATCCAGATGCAAATAAGAATAATCCATCTGCGAAGAGGAAATTTCAAGATATAAGAGAAGCATATGAGACATTGAGAGACTCTAAAAAGAGGGCAGAGTATGACATGATGCGATCTAGAGGTTCAGAAAACATAGAATATGGAGATGCTGATACAGAAAGGTTTAAAAATGCTTTTCGATCCCATTTTTCTGATTCATTTCATAATGTATTCTCAGAGATATTTGAGGAAGCAACAACTCAATTCTCGTCAAATATAGAGGTGGAGTTGTCTCTTACTTTCTCAGAAGCTGCGACAGGATGCACTAAACATGTATCATTTGATGCGTTCGTTCCCTGTGATTATTGCAATGGACAGGGCTATCCACTAAATGCCACTCCAAAAGTTTGTCCAACATGCAGGGGCTTAGGCCGAGTTACAATCCCACCATTTACATCAACATGCATTACTTGCAAAGGATCTGGCCGTATCATTAAGGACCTGTGTAAGTGGTGTGGGGGATCTGGGGCTGTTGAAGGAATGAAAGAGGTCAAAGTTACAATACCAGCAGGCGTGGACTCAGGAGATACAATCCATGTGCCAGAAGGTGGGAATGCTGCTGGAAGTGGAGGTCGACCTGGAAGTTTGTACATTAAGATAAAGGTGGCTGAGGATTCAGTCTTTGTCAGAGATGGTGCAGATATCTATGTGGATTCTAATATTAGCTTTACACAGGCTATTCTTGGTGGCAAAGTTGATGTTCCTACTTTATCTGGGAAGATGGAAGTAAAGATACCTAAGGGTGTTCAACCAGGACAGCTTCTGGTCTTTAGAGGCAAAGGATTGCCAAAGCATGGGTATCTTATACATCATGGGGATCAGTATGTGCGTTTCCGTGTTAATTTTCCAACTGCAATTAACGAACGACAACGTGCTATACTTGAAGAATTAGCGAAGGAGGAAATAAAGGCAGGAAACAGCTCATCATTTGAAGAAAACTGGTGGCAGCAAGTTCTTGAATACATGACGGGCTCAAAGTTTTTGCTGGAGCTATCTGTGCTGACATTATTCCTTCTCTTCATTAACAAAATGTTGAACTGA | 1410 | 0.4241 | MRRFTWLTPFRRHLLSSLSSEPIVVDKGDSLRKLLTSRQSLLLARALGNCSFVTKMEDSLSSRMPLRFRHIYAAAYSSSAERDYYRTLGVSESASQDEIKKAFHSLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAEYDMMRSRGSENIEYGDADTERFKNAFRSHFSDSFHNVFSEIFEEATTQFSSNIEVELSLTFSEAATGCTKHVSFDAFVPCDYCNGQGYPLNATPKVCPTCRGLGRVTIPPFTSTCITCKGSGRIIKDLCKWCGGSGAVEGMKEVKVTIPAGVDSGDTIHVPEGGNAAGSGGRPGSLYIKIKVAEDSVFVRDGADIYVDSNISFTQAILGGKVDVPTLSGKMEVKIPKGVQPGQLLVFRGKGLPKHGYLIHHGDQYVRFRVNFPTAINERQRAILEELAKEEIKAGNSSSFEENWWQQVLEYMTGSKFLLELSVLTLFLLFINKMLN* | 470 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g6002 | 469 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 330 | 417 | IPR008971 | GO:0006457|GO:0051082 | |
Lja1g6002 | 469 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 210 | 281 | IPR036410 | - | |
Lja1g6002 | 469 | PANTHER | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED | 34 | 446 | - | - | |
Lja1g6002 | 469 | ProSiteProfiles | dnaJ domain profile. | 83 | 148 | IPR001623 | - | |
Lja1g6002 | 469 | CDD | DnaJ_C | 194 | 407 | - | - | |
Lja1g6002 | 469 | Pfam | DnaJ C terminal domain | 196 | 406 | IPR002939 | - | |
Lja1g6002 | 469 | Gene3D | - | 194 | 324 | - | - | |
Lja1g6002 | 469 | CDD | DnaJ_zf | 223 | 279 | IPR001305 | GO:0031072|GO:0051082 | |
Lja1g6002 | 469 | PRINTS | DnaJ domain signature | 85 | 103 | IPR001623 | - | |
Lja1g6002 | 469 | PRINTS | DnaJ domain signature | 103 | 118 | IPR001623 | - | |
Lja1g6002 | 469 | PRINTS | DnaJ domain signature | 120 | 140 | IPR001623 | - | |
Lja1g6002 | 469 | PRINTS | DnaJ domain signature | 140 | 159 | IPR001623 | - | |
Lja1g6002 | 469 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 195 | 326 | IPR008971 | GO:0006457|GO:0051082 | |
Lja1g6002 | 469 | ProSitePatterns | Nt-dnaJ domain signature. | 125 | 144 | IPR018253 | - | |
Lja1g6002 | 469 | Hamap | Chaperone protein DnaJ [dnaJ]. | 80 | 444 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Lja1g6002 | 469 | Gene3D | DnaJ domain | 79 | 193 | IPR036869 | - | |
Lja1g6002 | 469 | PANTHER | CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL | 34 | 446 | - | - | |
Lja1g6002 | 469 | Gene3D | - | 327 | 436 | - | - | |
Lja1g6002 | 469 | ProSiteProfiles | Zinc finger CR-type profile. | 210 | 284 | IPR001305 | GO:0031072|GO:0051082 | |
Lja1g6002 | 469 | Pfam | DnaJ central domain | 223 | 279 | IPR001305 | GO:0031072|GO:0051082 | |
Lja1g6002 | 469 | Gene3D | - | 253 | 286 | - | - | |
Lja1g6002 | 469 | Gene3D | - | 219 | 252 | - | - | |
Lja1g6002 | 469 | SUPERFAMILY | Chaperone J-domain | 79 | 174 | IPR036869 | - | |
Lja1g6002 | 469 | Pfam | DnaJ domain | 83 | 145 | IPR001623 | - | |
Lja1g6002 | 469 | SMART | dnaj_3 | 82 | 140 | IPR001623 | - | |
Lja1g6002 | 469 | CDD | DnaJ | 83 | 137 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g6002 | Lja-Chr1 | 110844847 | 110860518 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g6002 | 74 | 150 | C2H2 Transcription Factor Family | AT1G74250 | 40.244 | 3.39e-08 | 53.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g6002 | - | - | lja:Lj1g3v0246820.1 | 857.44 |