Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5998 GACCATGATGTGCTCCCTTCTGCACATGTGAACTACGAAGATGCTAGTTCTATTTTGAACTACATCAACAACACTAACAAGCTTTGCAAGAGGGGACCTCTTGATTCAAAGAAGGCACATGGGAAAATACTGTTTTGTCATCTTGCTCGTGATAGTGATAAATATTCTTCCGAGTATGCAAAAGCTTTGGAAAGGGCTCGTGTTGGAGCAGTGGGTTTAATTTTGGGTCGAGCCAGAAATTTAATGGTCTTCTGTGTTGGTGACCATGATGTGCTCCCTACTGCACAAGTGAACTATGAAAATGCTAGTTCTATTTTGAACTACATCAACCGCACTAGCATGCTTTGCAAGATGGGAGCCCTTGATTCAAAGAAGGCACGTAGGAAAATACTGTTATGTCAGCTTGGTCGTGTTAGTGATAAAGATCCTTCCAAGTATGCAAAGGCTTTGGAAGCGGCTTGTGTTGGAGCAGTGGGTTTAATTTTGGGTCGGGCAAAAAATTTAATGGTTTTCAGTGTTGGTGACCATGATGTGCTCCTTACTGCACATGTGAAATATGAAGATGCTAGTTCTACTTTGAACTACATCAACCACACCAGGTCTCCCACGCCTAACATTTCTGGAGTGAAAACAGAATATGATGTAGAGCCTGCTCCCTATAAGCTGTATTTTCATCAAGGGGCCCGAATACTAATGATCCAGAAATTCTCAAGGTGGTGCTTAATTTTGCTTGATTATCAATTGCCCCTTAGGATTTCTTACTCCGTAAGTGACTATATATTTATTGTTGTTGCTTCTGCCAGACATCACCACAGCGGGCCAAGTACAGAGGATAGTTCTGGGAGGCCTATGATGGAGGAGCATTTTTCAGAATTGAAAGAAGCAACACCATTCGCATATGACGCAGATCACATCCAACCGAACATTGCCATGGACCCCAGAACTTGTCTATGA 954 0.4256 DHDVLPSAHVNYEDASSILNYINNTNKLCKRGPLDSKKAHGKILFCHLARDSDKYSSEYAKALERARVGAVGLILGRARNLMVFCVGDHDVLPTAQVNYENASSILNYINRTSMLCKMGALDSKKARRKILLCQLGRVSDKDPSKYAKALEAACVGAVGLILGRAKNLMVFSVGDHDVLLTAHVKYEDASSTLNYINHTRSPTPNISGVKTEYDVEPAPYKLYFHQGARILMIQKFSRWCLILLDYQLPLRISYSVSDYIFIVVASARHHHSGPSTEDSSGRPMMEEHFSELKEATPFAYDADHIQPNIAMDPRTCL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5998 317 CDD PA_subtilisin_like 98 203 - -
Lja1g5998 317 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 113 220 - -
Lja1g5998 317 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 27 111 - -
Lja1g5998 317 Gene3D - 114 211 - -
Lja1g5998 317 Gene3D - 23 113 - -
Lja1g5998 317 CDD PA_subtilisin_like 6 113 - -
Lja1g5998 317 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 113 220 IPR045051 -
Lja1g5998 317 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 111 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5998 Lja-Chr1 110749907 110752050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5998 113 313 Subtilisin-like Serine Gene Family AT5G59810 26.160 2.09e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5998 - - lja:Lj4g3v1387920.1 101.679