Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5985 ATGGCGGCCGCTCCCTCCCCTCGCGAAGAGTTCGTCTACCTCGCCAAACTCGCCGAACAAGCCGAGCGCTACGAGGAGATGGTTGAGTTCATGGAGAAGCTCTCCGCCGCCGTCGACGGCGAGGAACTCACCGTCGAGGAGCGTAACCTCCTCTCTGTTGCCTACAAAAACGTCATCGGCGCTCGCCGTGCTTCCTGGCGTATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGCGGTAACGAGGATCACGTCTCCATCATCCGTGACTACCGATCCAAGATCGAGTCTGAGCTTTCCAACATCTGCGACGGGATCCTCAAGCTTCTTGACTCCCGTCTCATCCCTGCTGCTGCTTCCGGTGACTCTAAGGTGTTTTACCTCAAGATGAAGGGCGATTACCATAGGTATCTGGCTGAGTTCAAGACCGGTACTGAGAGGAAAGACGCTGCTGAGAGCACTCTTGCTGCTTACAAATCTGCTCAGGATATTGCAAACTCTGAGCTGCCTCCTACTCACCCGATCAGGCTGGGCCTTGCTCTGAACTTCTCTGTGTTTTACTATGAGATTCTGAACTCTCCTGACCGAGCTTGCAGCCTTGCAAAACAGGCTTTTGATGAGGCCATTGCTGAATTGGATACATTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTTCTCCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGATGAAGGTGCAGATGAAATTAAAGAAGCCGCACCTAAACCTGATGAACAGTAG 780 0.5282 MAAAPSPREEFVYLAKLAEQAERYEEMVEFMEKLSAAVDGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSIIRDYRSKIESELSNICDGILKLLDSRLIPAAASGDSKVFYLKMKGDYHRYLAEFKTGTERKDAAESTLAAYKSAQDIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEGADEIKEAAPKPDEQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5985 259 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Lja1g5985 259 SMART 1433_4 8 251 IPR023410 -
Lja1g5985 259 PIRSF 14-3-3 2 250 IPR000308 -
Lja1g5985 259 Coils Coil 14 34 - -
Lja1g5985 259 Pfam 14-3-3 protein 14 238 IPR023410 -
Lja1g5985 259 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lja1g5985 259 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lja1g5985 259 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lja1g5985 259 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lja1g5985 259 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lja1g5985 259 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lja1g5985 259 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
Lja1g5985 259 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lja1g5985 259 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lja1g5985 259 Gene3D - 2 251 IPR036815 -
Lja1g5985 259 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5985 Lja-Chr1 110298980 110301481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5985 6 259 14-3-3 family AT1G78300 92.157 9.01e-175 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5985 K06630 - gmx:100792014 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5985 1 110298980 110301481 Lja1g5985 1 110298980 110301481 ECH