Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5917 ATGGGTAATGGCTCTCAGGAGCAACAATATCCACCACTTGTTAGACAAGGCTCTCTGTACAATAATCTCACATTTGATGAGGTTCAGAGCCAGTTGGGAAACACAGAGAAGCCTCTCCATAACATGAATTTGGATGAGCTTCTAAGAAATGTGATCTCAGCTGAAAGTGGACTAGTTGTGCAAAACCCTTTACCACCACCTGATTCATTTCTTTTAGGTAATAACACAGATTCGAATGGGGCTTCAAGCCACAAAACATCTAATGAGGTGTGGAGGGACATTGTTCACTCAGAACAAGTTTACAGGTCAGTGAACAATAACTTACAACAATCCATCTTGGGTCAAACAAATTTGGAGAGTTTTCTAGCTCGTGCAATGGACCCAATGGTCATGGGTTCACAACCACAAGAGTGGTTGCCATTGCAAGTTCCTGGTATTAATTTCCAACAACAGCCTCACCAGGAGCAACATCAACACATAAGAAGGTTGTGTCCAGATTTCAGTGTTTACAAACCAGTTTATGAGAACCAAGTTTTGGATATTGGTTACTCAGAAAACTCAATGGCAACAATGCCATCCACATGTTCTGATTCCAAGGAAGTTGATGATGTTAAGAGGAAGCATAGTTACTCTGATGAGATGCTGGAAAAGACTATTGAGAGGAGGAAGAAGAGAATGGCCAAGAATAGAGAATCTGCTGCAAGATCAAGGGCAAAAAAACAGGTAATGTAA 732 0.4112 MGNGSQEQQYPPLVRQGSLYNNLTFDEVQSQLGNTEKPLHNMNLDELLRNVISAESGLVVQNPLPPPDSFLLGNNTDSNGASSHKTSNEVWRDIVHSEQVYRSVNNNLQQSILGQTNLESFLARAMDPMVMGSQPQEWLPLQVPGINFQQQPHQEQHQHIRRLCPDFSVYKPVYENQVLDIGYSENSMATMPSTCSDSKEVDDVKRKHSYSDEMLEKTIERRKKRMAKNRESAARSRAKKQVM* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5917 243 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 242 IPR043452 GO:0003700|GO:0045893
Lja1g5917 243 MobiDBLite consensus disorder prediction 223 237 - -
Lja1g5917 243 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 224 239 IPR004827 GO:0003700|GO:0006355
Lja1g5917 243 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 3 3 242 - -
Lja1g5917 243 MobiDBLite consensus disorder prediction 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5917 Lja-Chr1 108226507 108229149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5917 13 242 bZIP Transcription Factor Family AT2G41070 37.398 1.72e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5917 K14432 - lja:Lj0g3v0284289.1 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5917 1 108226507 108229149 Lja1g5917 1 108226507 108229149 ECH