Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5866 ATGACAGAAATGTGTGGTACTGGCGATTTTGGCAAAATGTTCAACCGAGCAAAGCCTTATTTGTTCACAGTGGGGTTGCAATTTGGGATGGCTGGAACATACGTGTTCAGCATGGCCAGTCTGAATCATGGGATGAGTCGCTTGGTGTTCGTTGTGTACCGCAATGTCATCGCTGCAGTTGCGCTCGCTCCGTTTGCATTGTTCTTTGAAAGGAAGACTAGGCCGAAGATGACACTCTCTGTGTTCGTACAAATACTAGCTCTTGGATTTCTTGAGCCAGTAATTGATCAAGGCTTCACTTTCTTGGGGATGCAATACACCTCAGCTTCATTTGCATCTTCTGTCATGAACGCCGTACCCTCCGTGACCTTTGTGTTAGCAGTAATACTCAGGTTAGAGCGTGTAAAAATCAAAGAGTTAAGAAGTCAAGCAAAGGTGATTGGAACCTTGGTATCATTTGCAGGGGCCTTGTTAATGACACTGTACAAAGGTCCTCAAGTTCACCTATTCCATAACCCAAACACAACTCACCAGGAGAGTGGAAATCACTCCACTCAGAGTCACCAACACTGGATCGCAGGGACTCTCTTTATTGGTCTGGGTTGTTTGGCTTGGTCTTCTTTCTACATTTTGCAGTCCATAACAATAAGAAGGTACCCTGCGGAACTATCACTATCATCCTTGATTTGTTTGGTTGGTGCTATGGAAAGTGCTGTGGTTGCATTGGTTGCAGAACATCGCTCTCAAGCATGGACTATTGGTTTTGATTACAGGCTCTATGGCCCTCTCTACACTGGTATAATCAGTTCGGGTATAGCATATTATGTACAAGGGTTGGTAATGAAAAGCAGAGGTCCAGTGTTTGTTACATCCTTTAATCCTCTTTGCACGATCATCGTTGCAGCTTTGGGTTCCTTCATTTTAGGAGAACATCTCTACCTGGGAAGTATTATTGGAAGCATCATCATCGCAGTGGGTCTTTACTCTGTGGTTTGGGGAAAAGGGAAGGACTATGTAGACCTCACATCACCATCAGGAACAACAACACCAACAAAGGAAACGGAAAATTTACAGCTGCCAATTTCCTCATCAACTAATACTAAATAA 1107 0.439 MTEMCGTGDFGKMFNRAKPYLFTVGLQFGMAGTYVFSMASLNHGMSRLVFVVYRNVIAAVALAPFALFFERKTRPKMTLSVFVQILALGFLEPVIDQGFTFLGMQYTSASFASSVMNAVPSVTFVLAVILRLERVKIKELRSQAKVIGTLVSFAGALLMTLYKGPQVHLFHNPNTTHQESGNHSTQSHQHWIAGTLFIGLGCLAWSSFYILQSITIRRYPAELSLSSLICLVGAMESAVVALVAEHRSQAWTIGFDYRLYGPLYTGIISSGIAYYVQGLVMKSRGPVFVTSFNPLCTIIVAALGSFILGEHLYLGSIIGSIIIAVGLYSVVWGKGKDYVDLTSPSGTTTPTKETENLQLPISSSTNTK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5866 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 335 - -
Lja1g5866 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 164 - -
Lja1g5866 368 PANTHER WAT1-RELATED PROTEIN 13 356 IPR030184 GO:0016021|GO:0022857
Lja1g5866 368 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020|GO:0016021
Lja1g5866 368 Pfam EamA-like transporter family 20 160 IPR000620 GO:0016020|GO:0016021
Lja1g5866 368 MobiDBLite consensus disorder prediction 344 368 - -
Lja1g5866 368 PANTHER WAT1-RELATED PROTEIN 13 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5866 Lja-Chr1 105509244 105515708 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5866 11 340 Nodulin-like Gene Family AT1G44800 49.091 5.08e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5866 - - gmx:100777641 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5866 1 105509244 105515708 Lja1g5866 1 105509244 105515708 ECH