Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5864 ATGGGTGTGACAACGTGTTGTGACAAGGTGCATTCATGGTTCCGCGATTCAAAAGCGCTTTTGATAATCATAAGCCTGCAATTTGGCTCTGCTGGGATGTATGTTATCACCAAGGATGCTCTTAACAAAGGAATGAGTCATTATGTGTTTGTTGTTTACCGTAATATCATCGCCACTATAGTTCTTGGTCCCTTCGCATTTTTTCTTGAAAGGAAAACAAGGCCCAAGATGACAATTCGGATATTTTCAGAAATTATGGCTGTGGCTTTTGTCGAGATAATACTTGATCAGTGCTTCACCTTCCTTGGGATGAAGATGACATCAGCCTCTTTTGCATCAGCCGTGATGAATTCCGTACCATCCATCACCTTTGTACTCGCAATCATTTTTCGAGAAATAAGCACGTAG 408 0.4142 MGVTTCCDKVHSWFRDSKALLIIISLQFGSAGMYVITKDALNKGMSHYVFVVYRNIIATIVLGPFAFFLERKTRPKMTIRIFSEIMAVAFVEIILDQCFTFLGMKMTSASFASAVMNSVPSITFVLAIIFREIST* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5864 135 PANTHER WAT1-RELATED PROTEIN 15 131 - -
Lja1g5864 135 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 130 - -
Lja1g5864 135 Pfam EamA-like transporter family 20 130 IPR000620 GO:0016020|GO:0016021
Lja1g5864 135 PANTHER WAT1-RELATED PROTEIN 15 131 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5864 Lja-Chr1 105373454 105375875 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5864 18 131 Nodulin-like Gene Family AT1G21890 59.649 3.67e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5864 - - lja:Lj0g3v0307489.1 258.455