Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5842 ATGGAGATTGAATCCAAGTGGGTGGTCCTAATGGCCATTGCTGTTTTGATGTTGCGATACATTCTCAAGAATGTAAATTGGTGGTTGTATGAATCTAAATTGGGTAAGAAGCAGTACTCACTGCCCCCTGGTGACATGGGCTGGCCCTTCATTGGCAACATGTGGTCTTTCCTTAGAGCTTTCAAGTCCAGGGACCCTGATTCCTTCATGTCCTCCATTGTCTCTAGATATGGACGAAGCGGAATATACAAGGCCTTCATGTTTGGGAACCCAAGTGTGATTGTGACAACGCCTGAAGCATGCAAGAGAGTTCTGACAGATGACACTAAATTTGAACCTGGTTGGCCTCGCTCTACAATAGAACTCATGGGAAAGAAGTCATTCGTGTCAATTGAGTATGAAGAACACAAGCGTCTCAGGCGCCTGATATCGTCTTCAATCAATGGCATGGAAGCATTATCTCTGTACTTGACATACATTGAAGAAAATGTTATAAGTTCTTTGGAGAAATGGTCCAACATGGGAGAAATTGAATTCTTAACTCAGATGCGGAAGCTTACTTTTAAAATCATCATGCATATTTTCATTAGCTCAGAAAGTGAACATGTCATGGAGGCTTTGGAAAGAGAATACACTCAACTTAACCATGGAGTTAGAGCCATGCAGATTAATATTCCTGGATTTGCATACCACAAGGCATTCAAGGCGAGGAAAAAACTACTTGCCATATTCCAATCTATTGTGGACGAGAGAAGAGAGCAAAGGAAGACATTTGTACCAAAAAAAGCCAAAGATATGATGGATGCTCTGATTGATGTAGAAGATGATAAAGGGAGAAAGTTGAGTGATGAGGAAATCATTGATATCATGTTGATGTACTTGAATGCTGGTCATGAATCTTCAGGACATATCACCATGTGGGCGACCTATTTCCTGCAAAAGCACCTAGAATATCTCCAAAAGGCTAAGGCAGAACAAGAAGAAATAATAAAGAAAAGGCCTCCAACACAGAAAGGGTTGACTCTTAAGGAAATTCGACAGATGGAATTTCTTTATAAGGTGATTGATGAAACCTTGCGTGTGATTACATTCTCACTTGTGGTATTTCGAGAGGCAAAGTCTGATGTCAACATAAATGGTTACATCATTCCAAAAGGTTGGAAAGTGTTGGTTTGGTTTAGGTCGGTTCATCTTGATCCTGAAATATATCCTGATCCAATGCAATTTAATCCTAATAGATGGAATGAACACAAGGCCGGGGAATTTCTTCCCTTTGGAGCAGGAACTAGATTGTGTCCAGGCAATGATCTAGCCAAGATGGAAATTGCAGTTTTTCTTCATCATTTCATCATGAATTACCAGCTTGAACAGGTTAATCCGGAATGTCGAGTGAGATACTTACCTCATCCAAGGCCCATGGACAATTTCTTGGCAAGGATCAGGAAATGTTCACCTACATCAACCTAA 1467 0.407 MEIESKWVVLMAIAVLMLRYILKNVNWWLYESKLGKKQYSLPPGDMGWPFIGNMWSFLRAFKSRDPDSFMSSIVSRYGRSGIYKAFMFGNPSVIVTTPEACKRVLTDDTKFEPGWPRSTIELMGKKSFVSIEYEEHKRLRRLISSSINGMEALSLYLTYIEENVISSLEKWSNMGEIEFLTQMRKLTFKIIMHIFISSESEHVMEALEREYTQLNHGVRAMQINIPGFAYHKAFKARKKLLAIFQSIVDERREQRKTFVPKKAKDMMDALIDVEDDKGRKLSDEEIIDIMLMYLNAGHESSGHITMWATYFLQKHLEYLQKAKAEQEEIIKKRPPTQKGLTLKEIRQMEFLYKVIDETLRVITFSLVVFREAKSDVNINGYIIPKGWKVLVWFRSVHLDPEIYPDPMQFNPNRWNEHKAGEFLPFGAGTRLCPGNDLAKMEIAVFLHHFIMNYQLEQVNPECRVRYLPHPRPMDNFLARIRKCSPTST* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5842 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Lja1g5842 488 Coils Coil 204 224 - -
Lja1g5842 488 Pfam Cytochrome P450 42 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 SUPERFAMILY Cytochrome P450 37 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 Gene3D Cytochrome P450 31 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PANTHER ENT-KAURENOIC ACID OXIDASE 2 13 483 - -
Lja1g5842 488 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5842 488 PANTHER CYTOCHROME P450 26 13 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5842 Lja-Chr1 104937350 104942342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5842 7 480 Cytochrome P450 AT1G05160 66.876 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5842 K04123 - gmx:100781238 839.336