Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5793 ATGGAGGTGAAGGTGAAGCAGTTGCAATTGCACCGCGTGTTAATGGCTGCACTAGCATTAGCCTTGGTAGTAGCAGTTGCAGCTGGTGAAGCAATTTCTTCAGTAGCAACAGCAGCCACAACCCAAGTACAGACTCTGCCTGGCTGCATCTCCAGTTGTGGAGATGTCACAAATTTTCCTTATCCTTTTGGCATAGGCAACTCATCATCAAAACCAGATCAACCTTGTTACTTGGAGCCTAAATTCAGTCTCGATTGCAATGATTCTAAACTATATTTTAGGAACTTACCAGTTCTAGACATCGCCATCGAGGGTCAAATGGACGTAATGTTTAATGTCACGTGGGTATGCTATAACACAGATGGAAGCCGTTATGGGAGCAACGAAAGCAACCCTGTGCTCGACACAGCAAGTTTCAGCATTTCAACCAACGAAAATAAGCTCCAAGTTGTGGGCTGCAACAGTTATGGCTTTCTCTACGGCGACGAGGATGGTTCAATTTCAACACGCTGCACGACAAAATGCTTTGGCGATAACTCAATCAAAAACGGAACTTGTTCATCAGGCATAGGGTGTTGCCAGGTGGATGTTCCTCCGGGAGTGAGGAATATCACTTATTTAGGAGGATATGCTCTCAATCAAAACGAATCGTTGGGAACCTGCGTCTATTCATTTGCTGCGAAGCAAGGCTCATATAATTTTTCTTACACTGATTTACAAGGTTTTCATCACACAGGCTTCCCCTTGGTTCTTGATTGGACTGTAGGCAACAAGAGCTGCAATGCTTCAAAGAGTAGTACTGGCTACCCGTGCAAGAACAATAGTGACTGCTTCGACAAGGGCATAGATTATGGTTACCGATGCACATGTATGTCAGGTTATGAAGGAAACCCATACCATCCTGATGGCTGCACAGATATTGATGAGTGTAAGATCTCGAATCATACATGCATAGATGAAAATCACTGTCGCAACATCAATGGGTCTTACCAATGCTTTTGTCCAAAATGGCAATCTGGAGATGGAACTAAGAACGGAGGTTGCAGCAAACTTACCGAAGTTTTAATTGGAGCAGGAGCAGGGATTATTATTCTATTTGTGGGGATTGCCTCTCTGTACTTAACATACCAGAAAAGGAAACTAATGAAGCTAAAAGAGAAATTCTTCCGTGAGAATGGGGGTTTCATTTTGCTACAAAAACTCAGTACAAGAGAAGATTCCTCCCAAATTGCTAAAATTTTCACAGAAGATGAACTCAAGAAGGCCACCGACAACTATGACGAGAGCTTAATCATTGGTAGAGGAGGTTATGGCATAGTTTTCAAAGGAGTTCTACTAGATAAACGGATTGTTGCGATCAAAAAGTCCAGAATTGCAGATAAGAGTCAAATCGAGCAATTCATTAACGAGGTGGTTGTTCTGTCCCAAATCAATCATAGGAATGTGGTCAAACTCTTGGGATGTTGTTTAGAGACTGAAGTTCCTTTACTAGTTTATGAATTTGTTAGCAATGGTACCCTTTATGATTTTATTCATAGTGATGGCAAGGTGGATAATGTAACATGGAAAACTCGTCTGAGGATAGCGGCTGAGGCAGCTGGAGCATTATCATATCTTCATTCAGCAGCCTCAGTACCAATTATCCACAGAGATGTAAAGGGTGCCAACATTCTCTTGGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAAATTGGTTCCACTTGACCAAGCTGGTATAGCCACAATGGTGCAGGGCACTCTTGGATACTTAGACCCAGAGTATATGCAATCACAACATTTGACTGAGAAAAGTGATGTATATAGCTTTGGGGTAGTGCTTGTAGAGCTTCTAACAGGGGAGAAACCTATTTCCTTTGACAGGCCAGAAGAGAAAAGAAGCCTAGCTATGCACTTTCTGTACTGCTTGAAAGAGGACTGCATGTTTGATGTTGTTCAAGCTGGAATGATGAATGAAGAAAATAAGCAAGAGATAAAGGAGGTTTCTATTCTTGCAGCAAAGTGTTTGAGGCTTAAAGGCGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGATTAAGGCTAATGGAGAAGCCCCCCTGGACAAATAGAGAACAACATTTGGAGGAAACTCGATACTTGCTTCACAAGGAAGCCTCAAACATTTATAGCAGCAGCCTTCAGAATACTTGGTATGATCCCAATCTGTTACGACATATTGTAATCTTTATATGCATTCCTTTGTTTTTCGTTCAATATGTGTGTGAAACATCTTATCTTGTATTTGCTAAGTACTTAATAATAATCCAGCAGTTCAATTTTTTCTTAACTTAA 2352 0.4158 MEVKVKQLQLHRVLMAALALALVVAVAAGEAISSVATAATTQVQTLPGCISSCGDVTNFPYPFGIGNSSSKPDQPCYLEPKFSLDCNDSKLYFRNLPVLDIAIEGQMDVMFNVTWVCYNTDGSRYGSNESNPVLDTASFSISTNENKLQVVGCNSYGFLYGDEDGSISTRCTTKCFGDNSIKNGTCSSGIGCCQVDVPPGVRNITYLGGYALNQNESLGTCVYSFAAKQGSYNFSYTDLQGFHHTGFPLVLDWTVGNKSCNASKSSTGYPCKNNSDCFDKGIDYGYRCTCMSGYEGNPYHPDGCTDIDECKISNHTCIDENHCRNINGSYQCFCPKWQSGDGTKNGGCSKLTEVLIGAGAGIIILFVGIASLYLTYQKRKLMKLKEKFFRENGGFILLQKLSTREDSSQIAKIFTEDELKKATDNYDESLIIGRGGYGIVFKGVLLDKRIVAIKKSRIADKSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLYDFIHSDGKVDNVTWKTRLRIAAEAAGALSYLHSAASVPIIHRDVKGANILLDDTYTAKVSDFGASKLVPLDQAGIATMVQGTLGYLDPEYMQSQHLTEKSDVYSFGVVLVELLTGEKPISFDRPEEKRSLAMHFLYCLKEDCMFDVVQAGMMNEENKQEIKEVSILAAKCLRLKGEERPSMKEVAMELEGLRLMEKPPWTNREQHLEETRYLLHKEASNIYSSSLQNTWYDPNLLRHIVIFICIPLFFVQYVCETSYLVFAKYLIIIQQFNFFLT* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5793 783 SUPERFAMILY Protein kinase-like (PK-like) 407 696 IPR011009 -
Lja1g5793 783 ProSiteProfiles Protein kinase domain profile. 426 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g5793 783 ProSitePatterns Calcium-binding EGF-like domain signature. 306 332 IPR018097 GO:0005509
Lja1g5793 783 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 26 727 - -
Lja1g5793 783 ProSitePatterns Protein kinases ATP-binding region signature. 432 455 IPR017441 GO:0005524
Lja1g5793 783 Gene3D Plasmodium vivax P25 domain 244 352 - -
Lja1g5793 783 SMART egf_5 309 349 IPR000742 -
Lja1g5793 783 SMART egf_5 259 305 IPR000742 -
Lja1g5793 783 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 727 IPR045274 GO:0007166
Lja1g5793 783 Gene3D Phosphorylase Kinase; domain 1 398 501 - -
Lja1g5793 783 SMART egfca_6 306 349 IPR001881 GO:0005509
Lja1g5793 783 Pfam Protein kinase domain 428 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g5793 783 SMART serkin_6 426 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g5793 783 CDD STKc_IRAK 432 699 - -
Lja1g5793 783 Gene3D Transferase(Phosphotransferase) domain 1 502 722 - -
Lja1g5793 783 SUPERFAMILY EGF/Laminin 304 336 - -
Lja1g5793 783 Pfam Calcium-binding EGF domain 306 338 IPR001881 GO:0005509
Lja1g5793 783 ProSiteProfiles EGF-like domain profile. 306 344 IPR000742 -
Lja1g5793 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Lja1g5793 783 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 323 334 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5793 Lja-Chr1 103454141 103457226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5793 35 735 Receptor kinase-like Gene Family AT1G21230 43.759 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lja1g5793 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5793 - - gmx:100778914 912.909