Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5769 ATGGTGCCACCGGGGCCACCCACTCCGATTGGTGGTGCCCAGTCTTCCTTCCCGCAGATGGTTTCGCAGAGAACTCAGTTCAACAACATGAACAACATGCTAGGCAACATGTCCAATGTTACTTCCATGTTGAACCAGTCTTTCCCGAATGGAATTCCGAATTCCGGGCTCTCTGGTCCGGGAAGTAGCCAGCGTGGTGGTATTGATAATAGGGCTGAGCAGGATCCGTTGTCCAGTGTTGGCAACGGGATGAGCTTTGGCAACCCTTCGTCGCCGTTTGTGCAGTCCAATATGGTGAGCCCTGGTTCATCTGGTCAAGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGCAATTTTCAAATGCTTCTGGTAATCAGCTGTTGGCGGAACAACAACATGCCCAACAACTTGAAGCTCGAAATTTCCAACATAGTCAGCAGCAGTCAATGCAAGATTTTTCCACTCTGAACGCGCAGCAGCAACAACAGCAGCAGCATTTTCAATCAGTTCGAGGAGGGATGGGTGGTATTGGACCGGTGAAGTTGGAGCCCCAGGTAAACAATGATAAGTTTGGGCAGCAGCAGCAGTTGCCATCATTTAGAAATCTTGCTTCAGTTAAATTGGAACCGCAACAACTTCAGGCAATGAGAGGGCTGGCTCCTGTTAAAATGGAACCCCAGCATTCTGATCAGCAATTTTTGCATCAACAACAGCAGCAGCAGCAACTTCTCCAGATGTCAAGGCAATCCTCTCAGGCAGCTGCTGCACAGATGAATCTTTTGCAGCAACAGAGACTTTTGCAAATTCAACAACACCAGCAACAACTTTTAAAGGCAATGCCTCAACAACGGTCGCAGTTACAACAGCAGCTTCAACAGCAGAATATGCCGATAATGTCTCCTGCGAAACCAACATATGAACCTGGGATGTGTGCTAGGCGACTGACGCATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATCGATTTCTGGAGGAAATTTGTTACTGAGTATTTTGCTCCCAATGCCAGAAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAGATATGTAATCGCAAACCTGGACGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCCGGCCAGATTGTCCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCAAGGCGCCATGAAGAGCTCATCCCTAGAAAATTATTAATACCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAGTACCAGGCATTAACTCAAAATGAAACCTCCAATTTATCCGTTCCAGACTTACAAAATAATTGCAACATGTTTGTTGGATCAGCCCGTCAATTGGCAAAAGCTTTAGAAGTTCCATTGGTTAATGATTTAGGATATACGAAGAGATACGTACGGTGCCTACAGATATCAGAAGTGGTAAATAGCATGAAAGACCTAATAGATTATAGTAGAGAAACAGAGACTGGACCTATGGACAGCTTGGCTAAATTCCCTCGGAGAACTAGTGGTTCATCTCGACTACATAGTCAGGCACAACAGTCTGAAGATCAAATGCAGCAGCAATCACAGCCCCAGCAGCAGCAACAGCATATGGTGGCCCATACCTCAAATGGTGATCAAAACACTATGCAGACTGCTTCCCTGCAAATGACTTCTAACAATGGTGTTGCTTGTGTAAATAACACTGTCAATTCAGCATCTTCATCAACTGCCACGAGCACCATTGTTGGACTTCTCCACCAGAACTCTATGAACTCTAGACAGCAAAACTCTATGAATGTGACCAGCCCGTATGGAGTTAGTTCTGTTCAGATCACATCTCCAGGTTCCTCTAGTACGATGCCACAAGCACAACCAAACCCATCCCTTCAATCTTCAACACCGTCCGCATCTAACAACAACCCTCAAACATCTCACCCCGCCTTAACACCCGCAAATCACATTGGTACAGCAAACTCACCAGCTAACATTTCCTTGCAACAACAGCAGACATCTCTTTCAGGGGAAGCTGACCCTGGCGATGCTCAGAGCTCAGTCCAAAAGATCATTCATGAGATGATGATGTCCTCCCAGATGAATGTCACAGCAGGAATGGCAGGTAGGGGCTCTCTTGGAAATGACATGAAGAATGTAAATGGGATTCTACCAGCGAGTAATGGCATGGTTGCTAATGGGGCTATGAACAGTAATTCTGGTGTTGGTGTTGGAGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTATGGCCAATGGAGTGAGACAAGCAATGGGCAATAATTCAGTTATGAATGGAAGGATAGGAATGGCATCTATTGCCAGGGACCAAGCTATAAATCATCATCAGGATTTGTCAAGCCAACTACTTAGTGGGCTAGGAGCAGTTAATGGTTTTAGTAATCTTCAATTTGATTGGAAACCATCTCCATGA 2652 0.4521 MVPPGPPTPIGGAQSSFPQMVSQRTQFNNMNNMLGNMSNVTSMLNQSFPNGIPNSGLSGPGSSQRGGIDNRAEQDPLSSVGNGMSFGNPSSPFVQSNMVSPGSSGQGQGQGQGQGQQFSNASGNQLLAEQQHAQQLEARNFQHSQQQSMQDFSTLNAQQQQQQQHFQSVRGGMGGIGPVKLEPQVNNDKFGQQQQLPSFRNLASVKLEPQQLQAMRGLAPVKMEPQHSDQQFLHQQQQQQQLLQMSRQSSQAAAAQMNLLQQQRLLQIQQHQQQLLKAMPQQRSQLQQQLQQQNMPIMSPAKPTYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVTEYFAPNARKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRKLLIPQVSQLGAVAQKYQALTQNETSNLSVPDLQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETETGPMDSLAKFPRRTSGSSRLHSQAQQSEDQMQQQSQPQQQQQHMVAHTSNGDQNTMQTASLQMTSNNGVACVNNTVNSASSSTATSTIVGLLHQNSMNSRQQNSMNVTSPYGVSSVQITSPGSSSTMPQAQPNPSLQSSTPSASNNNPQTSHPALTPANHIGTANSPANISLQQQQTSLSGEADPGDAQSSVQKIIHEMMMSSQMNVTAGMAGRGSLGNDMKNVNGILPASNGMVANGAMNSNSGVGVGVGGYGTMGLGPSGMANGVRQAMGNNSVMNGRIGMASIARDQAINHHQDLSSQLLSGLGAVNGFSNLQFDWKPSP* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5769 883 MobiDBLite consensus disorder prediction 660 726 - -
Lja1g5769 883 MobiDBLite consensus disorder prediction 560 612 - -
Lja1g5769 883 MobiDBLite consensus disorder prediction 140 175 - -
Lja1g5769 883 PANTHER LIM DOMAIN-BINDING PROTEIN 13 882 IPR029005 -
Lja1g5769 883 MobiDBLite consensus disorder prediction 45 119 - -
Lja1g5769 883 MobiDBLite consensus disorder prediction 140 169 - -
Lja1g5769 883 MobiDBLite consensus disorder prediction 571 612 - -
Lja1g5769 883 Pfam LIM-domain binding protein 313 567 IPR029005 -
Lja1g5769 883 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 13 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5769 Lja-Chr1 102632032 102639408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5769 1 879 C2H2 Transcription Factor Family AT1G43850 58.974 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5769 - - gmx:100798031 1174.07