Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5730 ATGGGAGTTGGCCGTGAAGTCTCAATTTCACTTGATGGAGTGAGGGACAAGAACCTTATGCAGCTCAAGAAGCTCAATATTGCTCTTTTCCCTGTTCGTTACAATGACAAATACTATGCGGATGCACTTGCTTCTGGCGAATTCACTAAACTAGCTTACTACAGTGACATTTGTGTTGGGGCAATTGCGTGCCGGCTTGAGAAGAAGGAAGGTGGGGGGCAAGTTCGGATTTACATCATGACTTTAGGGGTTTTGGCACCTTACCGTGGACTTGGTATTGGAACAAAACTGTTGAATCATGTTCTTGATCTCTGCTCCAAGCAAAACATTTCTGAGGTTTACTTGCATGTGCAGACAAACAATGAAGATGCCATAAACTTTTACAAGAAATTCGGCTTCGAAATTACAGAAACAATCCAGAACTATTACACAAACATCACGCCACCAGACTGCTATATTCTCACGAGGCTTACAGCTCCAAGCCCAACCAAGAAATAA 498 0.4297 MGVGREVSISLDGVRDKNLMQLKKLNIALFPVRYNDKYYADALASGEFTKLAYYSDICVGAIACRLEKKEGGGQVRIYIMTLGVLAPYRGLGIGTKLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKKFGFEITETIQNYYTNITPPDCYILTRLTAPSPTKK* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5730 165 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 158 IPR000182 GO:0016407
Lja1g5730 165 PANTHER N-ALPHA-ACETYLTRANSFERASE 1 159 - -
Lja1g5730 165 Pfam Acetyltransferase (GNAT) family 48 133 IPR000182 GO:0016407
Lja1g5730 165 Gene3D - 5 157 - -
Lja1g5730 165 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 155 IPR016181 -
Lja1g5730 165 CDD NAT_SF 51 116 - -
Lja1g5730 165 PANTHER SUMO-CONJUGATING ENZYME SCE1 1 159 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja1g5730 Acetyltransf_1 6.1e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5730 K20793 - gmx:100499961 320.087