Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5729 ATGGATTGCAACAAAGATGAGGCAGCTAGGGCCAAGGAAATAGCTGAGAAGAAATTTTCTCTCAGGGAATATGCTGGTGCAAAAAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCACTGGAGGGTGTTCCCCAGTTTCTGTCAATTCTGAATGTTTATATCTCTGCTGAGAATAAAATAAATGGACAAATGGATTGGTATGGTATACTTGGAGTGGATCCCTTTGCTGATGAGGAGACAATTAGAAAGAAATACAGGGTATTGGCTCTCAGTCTTCACCCTGACAAAAATAGGTCTTTAGGTGCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGCTTACTATCTGATAAGGCCAAGAGACTAGCATACAACAACATCAGGAGTGTGGGTGGACTTCAGCATAATGCTCCCAACCATGTTGGGGCTCAATCAAAAGCACCCAGTTCAAATGGTTCTAATAATCCTAAGAAGAATGCAACCTCAAATGTGGGTGGACCTCAGCATAATGCTCCCAACCATGTTGGGGCTCAATCAAAAGCACCCAGTTCAAGTGGTTCTAATAATCCTAAGAAGAATGCAACCTCAGATGGGAGAACTGGAAATAATAATGCCCGGGCACCACCTTCACCCTCCATTCCTCGTCCACATAAAATGTCGGGTACCTTTTGGAGTTCCTGTAGTCGTTGCAAGGTACATTTTGAGTATCTCAGGGTTTATTTGGATCAAATTCTCCTATGTCCCAATTGTAAGGAAGCTTTTAAGGCTATAGAGAAGAGTCCGCCTCCTAATGCTGTTAAGTCATCTAATTCGGCTTCTCGGAAACATGATCAGAAGTCTCAACATCATGCTGGAAAGAATCACCCCATCAATCCGGGAAGAACTTCTGCAGTTTCTCAAGACAAGAAATCCAGCAGTTCTGCAGGCATGTCTTCTTTTAACAATACAAGCTTCCAGCGCGGTCCTCCCTCAAGAATGCCTGGTTTTGTTGGTGCAGATGGATCGTCGTCTGTTACTGCTGCAAGTAAGCAGCATTCAAGCAAGAAAAGAAAATTTGAAGGAGCTGCATCAATTACTTCGCGGGAGAAGAATCACCCCATCAATCTGGGAAGAACTTCTGCAGTTTCTCAAGACAAGAAATCCAGCAGTTCTGCAGGCATGCCTTCTTTTAACAATACAAGCTTCCAGCGTGGTCCTCCCTCAAGAATGCCTGGTTTTCTTGGTGCAGATGGATCGTCGTCTGTTACTGCTGCAAGTTTTAAGAAGCAATCAGGCGAGAAAAGAAGAAAATTTGAAGGAGCCGCATCAATTGCTGCGCGGGAGAAGAATAACATGTATAAGGCGTCTGATGGTTCTTTTAGTAACGTTGAAACCCCTATGGAGAAAATAAGGATAGATGATATTCACTTGTACAGGGCAAATCATATGACCATGCGAGATGGAGCAACCAGTTTGGGATCTGGAAAACCTAACATGGGAACAGAAAGGACTTATGGATTTCCAGGTGTAGCTATAAAGCATCACATGAGAGAGTTGTCCCTTTTTGAGACAAGGACCATGTTGATCAATAAAGCACAGTTTGAAATTCGCAAGAAACTTCAAGAATGGAGATCAGCAGCTCAAGCTAAGGCTAGAAAGAATGACAAAGGACATATAAGGCAGAAAAGCACATTTGATGAGAAAACAACTGGCCCAGAGAAGCATGGAGGCTCCAATTTTGATAGTAATAATTATATGAAATGTGATTCTATTGGTGAAAGTGTAAAGAAGAAGCAAGCATATGTTGCTATCAGTGTTCCAGATCCTGATTTTCACAACTTTGACCTGGATAGATCTGAAAATTCCTTTGAGGAGGACCATGTTTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATTTTATGCTAGAATTCACAAGGTGATCTCCGCGAAGCCGTTTAGAATACAGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATGAACTGGGTAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGGCTTGGCAGGCATGAGATAACTGAATCATTAAATTCATTTTCACACAAGGTAAGGTGGACAAAAGGCAGAGGAGTTTTTCGCATCTTTCCCGGAAAGGGGGAAATCTGGGCACTCTATAAGAACTGGTCTCTTGATTGGAATGAAAACACTCCGGATGAAGTGGTACACAAGTATGATATGGTGGAGGTGCTTCAAGATTTCAGTGAGGAGGAAGGTGTTTTAGTTGCTCCACTTGTTAAGGTTAACGGTTTCAAGACGGTGTTTCGCAGGCACAGCCATGGTCAGGTAAGGAAAATTCCTAAAGTGGAGATGTTCTGCTTCTCTCATCAGGTTCCGAGTTATTCGCTGACAGGACAAGAATCTCATAATGCTCCGAAGGGCTGTCGAGAGTTGGATCCAGCAGCCACTCCTTTGGACCTCCTTCAGGCAACAACAGAAGCTGATGAAGCATTGGATAATGTTGGGAAATCGAAGGAAGACAAAATGCCCAGTTCATCTGAAAAATGTGTTTGTTAA 2562 0.4301 MDCNKDEAARAKEIAEKKFSLREYAGAKKFALKALNLYPALEGVPQFLSILNVYISAENKINGQMDWYGILGVDPFADEETIRKKYRVLALSLHPDKNRSLGAEGAFKLVSEAWSLLSDKAKRLAYNNIRSVGGLQHNAPNHVGAQSKAPSSNGSNNPKKNATSNVGGPQHNAPNHVGAQSKAPSSSGSNNPKKNATSDGRTGNNNARAPPSPSIPRPHKMSGTFWSSCSRCKVHFEYLRVYLDQILLCPNCKEAFKAIEKSPPPNAVKSSNSASRKHDQKSQHHAGKNHPINPGRTSAVSQDKKSSSSAGMSSFNNTSFQRGPPSRMPGFVGADGSSSVTAASKQHSSKKRKFEGAASITSREKNHPINLGRTSAVSQDKKSSSSAGMPSFNNTSFQRGPPSRMPGFLGADGSSSVTAASFKKQSGEKRRKFEGAASIAAREKNNMYKASDGSFSNVETPMEKIRIDDIHLYRANHMTMRDGATSLGSGKPNMGTERTYGFPGVAIKHHMRELSLFETRTMLINKAQFEIRKKLQEWRSAAQAKARKNDKGHIRQKSTFDEKTTGPEKHGGSNFDSNNYMKCDSIGESVKKKQAYVAISVPDPDFHNFDLDRSENSFEEDHVWAAYDDDDGMPRFYARIHKVISAKPFRIQISWLNSRSNSELGPMNWVGSGFYKTCGDFRLGRHEITESLNSFSHKVRWTKGRGVFRIFPGKGEIWALYKNWSLDWNENTPDEVVHKYDMVEVLQDFSEEEGVLVAPLVKVNGFKTVFRRHSHGQVRKIPKVEMFCFSHQVPSYSLTGQESHNAPKGCRELDPAATPLDLLQATTEADEALDNVGKSKEDKMPSSSEKCVC* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5729 853 MobiDBLite consensus disorder prediction 833 847 - -
Lja1g5729 853 PANTHER BNAC03G44070D PROTEIN 382 842 - -
Lja1g5729 853 PANTHER BNAC03G44070D PROTEIN 1 380 - -
Lja1g5729 853 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lja1g5729 853 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lja1g5729 853 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lja1g5729 853 SUPERFAMILY Chaperone J-domain 63 141 IPR036869 -
Lja1g5729 853 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lja1g5729 853 PANTHER HEAT SHOCK PROTEIN-LIKE 1 380 - -
Lja1g5729 853 MobiDBLite consensus disorder prediction 542 578 - -
Lja1g5729 853 MobiDBLite consensus disorder prediction 133 219 - -
Lja1g5729 853 Pfam DnaJ domain 66 127 IPR001623 -
Lja1g5729 853 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lja1g5729 853 MobiDBLite consensus disorder prediction 261 434 - -
Lja1g5729 853 MobiDBLite consensus disorder prediction 827 853 - -
Lja1g5729 853 Gene3D DnaJ domain 63 177 IPR036869 -
Lja1g5729 853 MobiDBLite consensus disorder prediction 294 324 - -
Lja1g5729 853 MobiDBLite consensus disorder prediction 363 401 - -
Lja1g5729 853 MobiDBLite consensus disorder prediction 542 569 - -
Lja1g5729 853 CDD DnaJ 66 119 IPR001623 -
Lja1g5729 853 SMART dnaj_3 65 122 IPR001623 -
Lja1g5729 853 MobiDBLite consensus disorder prediction 133 210 - -
Lja1g5729 853 PANTHER HEAT SHOCK PROTEIN-LIKE 382 842 - -
Lja1g5729 853 Pfam Domain of unknown function (DUF3444) 599 802 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5729 Lja-Chr1 101732236 101737463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5729 4 127 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 41.538 1.22e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5729 - - ccaj:109791144 879.782