Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5715 ATGGATTCTCCTGCCCAGCCCATTGAGCCCAGCCCCTTGCGGAAGATGATCGCGGTGGCAGCCATTGCCATCGGTATACAGTTTGGGTGGGCGTTACAACTTTTGCTCCGCACACCGTATATTCAGCTCCTTGGCGTCCCACACAGGATGCATGTACAGCCCATAGTGGGCTATTACAGCGACCGGTGCACCTCCCCTTTTGGTCGCCGCTGCCCCTTCATCTTTGTCGGCATGATTGCAGTGGCCATCGGGTTCTTACTCATCAGCTACGCAGCCGACCTGGGGCACGGCCCCTATCGCGCCTTCCTAGGCGATATTTTCGTCGGTGACTACAGTCGTATCCGAATTGGCAACACCCTCTTCTGCTTGTTCATGGTTATAAACCAGTTTTGCGCAAACTTGAAATCATGTTTCTTAATCTCAATCACCCTGTTGATCGTACTTGCCAGCTTTACCCTATATTATGTATCTGACCCGCCACTTGTGTCGGGTGACCGAGATGAGAGTCATCGAACAATTTCATGCTTCGCAGAGCTCTTCAGCACATTCAAGGAGTTGGTGACCGCTTGCAACTGGCTAGCATGGTTCCCCTACATCTTGTACAACACTGACTGGATGGGGCTTGAGGTGTACGCTGGGGATGCAAGCATTGAGACATACGGTGCCGAAGTTCGTGCTGGAGCATTAGGACTTATGCTGAACTCGGTGGTGCGTTTCTTTACATCCCTAGGAGTGGAGCGGTTGGGGCGTTGCGTCGATGGACCTACGAGACTTTGTGGGTTAGTTAATTTTATTCTAGCCGTTTGCCTTGTGATGATGGTGCCCATTACCAAGGTGGCAGAGCACCAACACCACGTGAGTGGAGGCGCCACCATCGGGAAGCCATCCCCAGACATCCCATTTGCTCTAGCCTCAATATACTTTATCACTACAGGCAGCGTATCTTTGGGAATCCTCAATATATTTGTCACTTACTCTATTTCTAAACTACGTTAG 996 0.511 MDSPAQPIEPSPLRKMIAVAAIAIGIQFGWALQLLLRTPYIQLLGVPHRMHVQPIVGYYSDRCTSPFGRRCPFIFVGMIAVAIGFLLISYAADLGHGPYRAFLGDIFVGDYSRIRIGNTLFCLFMVINQFCANLKSCFLISITLLIVLASFTLYYVSDPPLVSGDRDESHRTISCFAELFSTFKELVTACNWLAWFPYILYNTDWMGLEVYAGDASIETYGAEVRAGALGLMLNSVVRFFTSLGVERLGRCVDGPTRLCGLVNFILAVCLVMMVPITKVAEHQHHVSGGATIGKPSPDIPFALASIYFITTGSVSLGILNIFVTYSISKLR* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5715 331 SUPERFAMILY MFS general substrate transporter 16 275 IPR036259 -
Lja1g5715 331 PANTHER SUGAR TRANSPORTER 7 96 - -
Lja1g5715 331 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 7 96 - -
Lja1g5715 331 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 129 323 - -
Lja1g5715 331 PANTHER SUGAR TRANSPORTER 129 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5715 Lja-Chr1 101290787 101293541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5715 2 323 Sucrose Transporter Gene Family AT1G71890 40.783 1.65e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5715 K15378 - gmx:100785359 295.049