Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5668 ATGGAAGAAACATTTGTTCCCTTCCGTGGGATTAAGAATGACCTCAAAGCAAGACTTTTGTGCTACAAGCAAGATTGGACTAGTGGACTGCGAGCGGGTGTCAGGATCCTTGCCCCCACTACCTACATATTTTTTGCTTCAGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAAAGAAGTACAGATGGAACTCTCACTGCTGTGCAAACTCTTTCATCAACTGCTCTATGTGGTGTTATCCACTCAGTCATTGGAGGGCAGCCTCTACTCATACTAGGTGTAGCTGAACCAACAGTTCTGATGTATACATTTATGTACGACTTTGCGAAGGATCGAAAGGATTTGGGACACCAGCTTTTCCTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCCCTTTTGCTCTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCAATAGATTCACGCGCCTTGCTGGTGAACTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGGTCACCCAAGACCCAGAGAGAAGGTACCGATCAGATGGCACTCCCATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTTTTCACTGGTCTAGGAAGCCGTAAGGCTAGATCCTGGCGTTATGGGACAGGTTGGCTGCGGGGATTAATAGCTGATTATGGAGTTCCCCTAATGATTCTCCTATGGACTGCTGTGTCTTACATACCAGTCAATAAGGTTCCGAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCCAGGAAATGTTGAACGTGCCTCCTATGTACATTATTGGAGCTTTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTCGCGCAGCAGAAGGAGTTCAACCTAAGAAAACCCTCATCTTATCATTATGACTTGTTACTCTTGGGCTTTTTGACCATATTATGTGGGCTTATTGGAATACCTCCTTCCAATGGTGTCATTCCACAATCTCCAATGCATACAAAGAGCTTAGCTACTCTAAAACAACAGCTTTTACGGCATAGGCTTGTATCAACTGCAAAACAAAGCATGCAGAAAAATATGAACCTGAGTCAGTTCTACCAAAGTATGAAAGAGGCATATGATGTAATGCAGACTCCATTGGTTCCCCAAATGCCACCGACCTCGGGGCTGAAAGAGCTGAAGGAATCTACCATAGCACTAGCTTCAAGTCAAGGATACATTGACGCCCGTGTTGATGAGATCGTCTTCGATGTGAATAAGGATGTTGATGACCTTTTGCCAGTCGAAGTTAAAGAGCAGCGCGTCAGCAATCTACTGCAGGCATTAATGGTTGGGGCTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTATTTTGCCTTCATGGCAATTGAAAGCTTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTATCTTTTCACAGCTCCAAGTAGAAGATACAAACTGCTGGAGGAGCATCATGCCACCTTTGTTGAGACTGTGCCCTTGAAAGCAATTGCCTTATTTACTTTGTTCCAAACATTTTACTTGCTTCTTTGCTTTGGCTTAACGTGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTCGTCCCGGTCCGGCAATATTTTCTTCCCAAGTTTTTCAAAGGAGCCCATCTTCAAGAGTTGGATGCAGCAGCATATGAGGAAGCACCTGCCATTGCTTTCAACATGTCCTTTGAAGATCCAAGTAGCCACGGAACTACAGTGAATATCAGTGGTGGGGAAATTCTTGATGAAATCATTACAAGGAGTCGTGGCGAGATACGTCGCACTCAAAGCCCCAAAACATCAAGTTCAACTCCAATTTCTACAGGAGATATAAGGCCTGCTAATAGCCCTCTGAGTAATGGTACTGAGAGGGGAAAGCGGCCTACGAGCAACTTTGAAGGAGATAAAGTTAATACAAAATCCTAG 2091 0.4452 MEETFVPFRGIKNDLKARLLCYKQDWTSGLRAGVRILAPTTYIFFASAIPVISFGEQLERSTDGTLTAVQTLSSTALCGVIHSVIGGQPLLILGVAEPTVLMYTFMYDFAKDRKDLGHQLFLPWTGWVCVWTALLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVEEFGSPKTQREGTDQMALPSSWLFGNGMFALVLSFGLLFTGLGSRKARSWRYGTGWLRGLIADYGVPLMILLWTAVSYIPVNKVPRGIPRRLFSPNPWSPGAYSNWTVVQEMLNVPPMYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKQQLLRHRLVSTAKQSMQKNMNLSQFYQSMKEAYDVMQTPLVPQMPPTSGLKELKESTIALASSQGYIDARVDEIVFDVNKDVDDLLPVEVKEQRVSNLLQALMVGACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEHHATFVETVPLKAIALFTLFQTFYLLLCFGLTWIPIAGVLFPLLIMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEDPSSHGTTVNISGGEILDEIITRSRGEIRRTQSPKTSSSTPISTGDIRPANSPLSNGTERGKRPTSNFEGDKVNTKS* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5668 696 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Lja1g5668 696 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016021
Lja1g5668 696 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Lja1g5668 696 PANTHER ANION EXCHANGE PROTEIN 1 674 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lja1g5668 696 MobiDBLite consensus disorder prediction 646 696 - -
Lja1g5668 696 PANTHER BORON TRANSPORTER 2-RELATED 1 674 - -
Lja1g5668 696 MobiDBLite consensus disorder prediction 650 682 - -
Lja1g5668 696 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5668 Lja-Chr1 100044958 100050543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5668 1 672 Antiporters AT3G62270 75.371 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5668 K24194 - gmx:100793554 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5668 1 100044958 100050543 Lja1g5668 1 100044958 100050543 ECH