Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5465 ATGGCAGCAAAGCTCCTGCATTCTTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCACCCTACTCTCACGGCTCGCCGCAGTAGCAGCCAGAAGAAGTTTCCATATGGTAATGCATACATCAGTGGTGGCAGCTTGGACAGAGATCCTAACAGCAGACACCATGGACATACAGCAATTGATACAAGCTTAAACAAGGTTGTGACTGAAAAGCAAAGAATTTCAACAGAATCATCAAGAGCATCATTCTCTTCTTGTTCATCATCAGTATCCTCTCTGGACTGTAAGGCTGAAGTAGACGCTCCCTTTGACCGGATTATTTTCCCGGAAACTCCTTCAAGGGACACAGTTATGAACCAACCAACTATCTCATCCCATTTAGGACGGCACTCACTCGATCTTAGGGATGTGGTGAAGGATTCCATGTACAGGGAAGCACGAGGACTGTCGTTGAAGACTACAGCCAAAGAGGAAGGCATTCATGCCATGAAGCACAGGGATTCCCCACGACCAGTTTTGCTATCCAAATCTGTTGATGGAGCTTATGGAGTTGGAATAGATGGAAAACAAAGTGCGCCTATTGATCTAAAGGAGTCTATCCGAGTTCTTGCTAAACTTAGAGAAGCACCTTGGTATTATGCAGAAACTAGAGAGCTTCCAAGATCATCACATGAAGCTAAAGATGGACACTGGCATTCCATCCCAAAGGATGCTCCTTGGTTTGCTTATGATGGAAGAGAAACGAGTCGCCTATCTTTCGAATCGCGAGATACCATCAAATCCACACCAAAGCTAAAAGAGCTTCCTAGACTTTCTCTGGATAGTAGGGAAGGTTCATGGCGCGCTTATAGCTCTGATTCAAAACACAGCCAGCTACAAAGAAATGTTAACAGTGGCACTGGCACCTCTACCTCAGATGAAAAATTCTCTAGCCTGCAACAGAGTCGGCCGCCGAGTGTTGTGGCAAAACTAATGGGCTTGGAAGCCTTACCAGATTCCTCTTTAGGTGGTGATAACCAATCAAGGTCAACTGAAACTTTCTCGGCTCGAAATAATGATCAGTTTCCAAGATCATCTTCAAAGAATGGATTCACTAGGCCACTCCGAGTTTCTAATTCTCCGAAAAGCTCTTTGAAAGATCCAACTTCACCAAGGAGGAAGAATCCTGATGTGGTTATGAAACCCCTCTCAAGTTCAAAGTTTCCCATTGAACCGGCGCCATGGAAGCAGCAGGATGGAAACAGAAGATCTCAGAAATTAAGTTTAAGGCCCACAAAAGCACCTCTAAGAACATCAGATTCATTCCCTTCAGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTGAGAGCATTAAAGCAGATTCTTGAGGCAATGCAAGAAAAGGGGCTGTTGGAGAGCAGAAAAGAAGAACAAGGTCCAAATGTTGATGGAAATCAAAGTGATCACTATGAATCAAGAGCTACCAAACTTATTCAGAATTCCAGGTCAGCTAGGCAACAAAATCCTCAAGGAAACAGTTTTCTATCTTCCACGATCAAGGGATCTGACTCATCAGCAAGGGGTTTTGAATCCCCAATAGTGATAATGAAACCAGCTAAACTTGTTGAGAAAACTGGGATTTCTGCTTCTTCAGTCATTCCAATTGGTGGCTTTTCTGGCTCCCATAAACTCCACAATAGTGGTGCATATGTAGATAATCAAAACAACACATCTTCTACTCGGGCAGCGAAAGATCAGTCTCCCAAAAACATTCGCCGTGATGCCTCTGCAGGTTCCAGTGATAAGAAAGCAAGTGGTACCAAAACAACAAGATCAGCACAATCTCAATCCAGGTCAAACCAACTTCCAAAAGATAATAGCCAAAGTTCAGTTAAGCACTCTGGATCTGTGAGCCCAAGATTGCAGCAACAGAAAAAGTTGGAGTTAGAGAAGCGATCTCGTGATTCTCGTCCACCTACCCCACCATCAGATTCAAACAAACCCAGAAGGAAATCATCTGGTAAGAAGGCCACAGAATCAGGTTCCCCAGGTGGAAAACTAAGAACCAAAGTCCCCAACTCACAGCATTGTGATGAGCAACTCAGTGAGATAAGCAATGATTCATTAAGTGTAAGTTGCCATGGGGATGAACTTTCTCTGCAATCAGACAGCACCGCCGAAGTCACCAGCAGGTTCCAATCTGCTGATATTGATGACAGCCGAAGCCAGTCCTTGAAGGCTATAAAGCAGTTGGTTTCGGAAGCAGTTCATGAAAAATCAACTCCCAGGTTGGATGAGGATGAGACAATTGCAGAACTTGCAACGGATGCGCCAGAACACCCAAGTCCTGTCTCAGTTCTTGATGACTCAGTATATAGAGATGATCTGCTATCCCCTGTAAAGCAGATATCTGAAGTTCCAAACGCTGATGATGCTCAAGAAACTGAAGAAAATGAGGCTAAAGATGAGTGGAACCCTGTAGTAGATAGCCTTTCATTTAACAGCACAGGATCCGCAGAGATCAATCGCAAGAAATTACAGAACATAGATCACCTTGTGCAGAAGCTTCGACGGCTGAACTCTAGTCACGACGAAGCAAGAATCGACTACATTGCTTCCTTATGTGAAAACACAAATCCAGACCACAGATACATCTCTGAAATATTACTAGCTTCAGGTCTCCTACTAAGAGACCTAAGTTCTGAGCTGCTAACATTTCAACTTCACTCGTCGGGTCACCCCATCAACCCCGAGTTATTCCTCGTCTTGGAGCAGACCAAGGCTAGTAATTTGCTTTCGAAAGAAGAGAGCAACAATGGAAAAATCACTTGCTTGAAGCTGAATGCTGAGAGATTTCACAGGAAACTCATCTTTGACGCTGTGAATGAAATTCTTGGTGCGAAATTAGCCTCCTCCCCTGAGCCGTGGTTTCAGCCGAACTGTGACAGACTCACGAAGAAATCGCTCAGTGCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATAGAAAAAGTTCAAGCCAAGAAGCCAGGGTGGTGCTTAGAATTGGAAGGTGAAGAGGATGATGGTCTGAAAAGTATTCTGTGGGAAGATGTGATGCATGAAGGTTCAGAAAGTTGGAAAAACTTCAATGGTGAAATACCTGGGTTTGTTTTGGATGTTGAGAGACTCATATTTAAGGACTTAGTAGGTGAGATTGTGATTGGAGAAGCCGCTAGTATGCGGCTCAAGCCATCGGTTAGGCGCAGGAAACTATTTGGAAAGTAG 3315 0.4392 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHPTLTARRSSSQKKFPYGNAYISGGSLDRDPNSRHHGHTAIDTSLNKVVTEKQRISTESSRASFSSCSSSVSSLDCKAEVDAPFDRIIFPETPSRDTVMNQPTISSHLGRHSLDLRDVVKDSMYREARGLSLKTTAKEEGIHAMKHRDSPRPVLLSKSVDGAYGVGIDGKQSAPIDLKESIRVLAKLREAPWYYAETRELPRSSHEAKDGHWHSIPKDAPWFAYDGRETSRLSFESRDTIKSTPKLKELPRLSLDSREGSWRAYSSDSKHSQLQRNVNSGTGTSTSDEKFSSLQQSRPPSVVAKLMGLEALPDSSLGGDNQSRSTETFSARNNDQFPRSSSKNGFTRPLRVSNSPKSSLKDPTSPRRKNPDVVMKPLSSSKFPIEPAPWKQQDGNRRSQKLSLRPTKAPLRTSDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQGPNVDGNQSDHYESRATKLIQNSRSARQQNPQGNSFLSSTIKGSDSSARGFESPIVIMKPAKLVEKTGISASSVIPIGGFSGSHKLHNSGAYVDNQNNTSSTRAAKDQSPKNIRRDASAGSSDKKASGTKTTRSAQSQSRSNQLPKDNSQSSVKHSGSVSPRLQQQKKLELEKRSRDSRPPTPPSDSNKPRRKSSGKKATESGSPGGKLRTKVPNSQHCDEQLSEISNDSLSVSCHGDELSLQSDSTAEVTSRFQSADIDDSRSQSLKAIKQLVSEAVHEKSTPRLDEDETIAELATDAPEHPSPVSVLDDSVYRDDLLSPVKQISEVPNADDAQETEENEAKDEWNPVVDSLSFNSTGSAEINRKKLQNIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGHPINPELFLVLEQTKASNLLSKEESNNGKITCLKLNAERFHRKLIFDAVNEILGAKLASSPEPWFQPNCDRLTKKSLSAQKLLKELCFEIEKVQAKKPGWCLELEGEEDDGLKSILWEDVMHEGSESWKNFNGEIPGFVLDVERLIFKDLVGEIVIGEAASMRLKPSVRRRKLFGK* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5465 1104 MobiDBLite consensus disorder prediction 660 674 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 485 542 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 424 446 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 499 541 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 616 659 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 818 839 - -
Lja1g5465 1104 Pfam Domain of unknown function (DUF4378) 897 1081 IPR025486 -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 582 601 - -
Lja1g5465 1104 PANTHER LONGIFOLIA PROTEIN 1 1102 IPR033334 GO:0051513
Lja1g5465 1104 PANTHER LONGIFOLIA PROTEIN 1 1102 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 295 330 - -
Lja1g5465 1104 Pfam DUF761-associated sequence motif 327 347 IPR032795 -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 582 758 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 344 446 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 710 758 - -
Lja1g5465 1104 MobiDBLite consensus disorder prediction 347 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5465 Lja-Chr1 93352791 93358811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5465 138 1103 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 48.830 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5465 - - gmx:100787391 1570.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5465 1 93352791 93358811 Lja1g5465 1 93352791 93358811 ECH