Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5440 ATGGAATTAGGAGGATGCGGTTCAAATCAGCGTAAAGCTGCTTTCCTCACAGTTTCATCGTCTTCGCTTGATGTTGGAGTGGTGCCAGATGGGAACGCGGTTTCAGACATTTTGAACAGCTCCGATTCGAGCGGGATGGTGGTTTCCGGCGGCGGCGGAAGCCAGCCGGCGACGCAGCTCTGCGGGATGGATCGGGAGGCAAGGGTTCTGAGATACAGGGAGAAGAGGAAGAACCGGAAATTTGAGAAAACCATCTTCCATCCCGTAAGAACGTGGCTGTTGACACTTCTTGGTATGAGGTTCTGGATAGCTTTTTGCAATTCAGGAGCAGGTGGTATGCTTTCCTTCACTGTGGGGTCAAAGGGATTGTTGAGGGTGTTATTGTTGGCGAGCTTGAGATAA 402 0.5124 MELGGCGSNQRKAAFLTVSSSSLDVGVVPDGNAVSDILNSSDSSGMVVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTIFHPVRTWLLTLLGMRFWIAFCNSGAGGMLSFTVGSKGLLRVLLLASLR* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5440 133 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 14 86 - -
Lja1g5440 133 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 14 86 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5440 Lja-Chr1 92364000 92374523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5440 23 90 C2C2-CO-like Transcription Factor Family AT5G57660 55.882 9.68e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5440 - - gmx:100792197 98.9821