Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5369 ATGGATGGGAACAAGGACGATGCGCTCAAGTGTTTCAGAATCGCCAAAGAGGCGTTAGAAAGCGGCGATCGGTCACGCGCGTTGAAATTCGTGAGCAAAGCTCGCCGTCTCGACCCCACTCTGCCCGTCGACGATCTATTGACGGCGATAGGGGGCGGCGGCGGCGCAGGCGACAATCCCACCGAAGCAGCTGCCGAGCCGGGGAAGCCCGCTGCTGATAATCCCTCTGTCCGCCGAAGGTCTTCGGCTTCGGCCGCGGCAGCACCGGTTCCTCCGTCATCCTCATCATCATCGTCAGCCTCATACACCACGGAGCAGGTTTCAATTATCAGGGAAATTAAGAGGAAGAAGAACTACTACGAGATTCTAGGTTTAGAGAAGAGTTGCACCGTTGAGGACGTGCGGAAATCCTATAGAAAGCTCTCTCTGAAGGTCCATCCAGACAAGAACAAAGCCCCCGGCGCTGAGGAAGCGTTCAAGGCGGTGTCGAAGGCGTTTCAGTGTCTAGGCAATGAGGAGAGCAAGAGGAAGTATGATCTTTCCGGAGAAGATGAATCTGTCTATGAGAGGCGTGCTGCAGCGAGGCCGGGTCCGGGGGCGGCGAGGGCTTATAATGGCTACTATGAGGCTGATTTTGATGCTGATGAGATATTCAGGAATTTCTTCTTTGGAGGGATGCGTCCTACAGCAACAGCTAGCTTTGGAGGGTTTAGTTTTGGACCTGGGATGGGTCACAGGCATGCTGATAATGATAATCATGGCTCTGGTGGTGGCTTCAATGCACGCGCTTTGATTCAATTGTTTCCGGTCTTGCTTATTTTACTCATTAACTTTTTGCCCTCATCGGAACCAATCTATACACTTTCTCAAAGCTACCCTTATGAGCATAGAGTTACTACACCTAGGGGTGTTAACTACTATGTTAAGTCCACAAAGTTTGCTCAGGATTATCCTGAGGGTACCCGTGAGCGTGAGACGGTTGAGGACAAGGTTGAGAGGGAGTACTTCGGCATCCTTCGCCAGAACTGTCAGTTTGAGTTGCAGCGTCGCCAGTGGGGCTATATCAAAGAAACTCCACACTGTGATATTCTCCGGAAATATGAGTTGGTAAACTAA 1116 0.5134 MDGNKDDALKCFRIAKEALESGDRSRALKFVSKARRLDPTLPVDDLLTAIGGGGGAGDNPTEAAAEPGKPAADNPSVRRRSSASAAAAPVPPSSSSSSSASYTTEQVSIIREIKRKKNYYEILGLEKSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLGNEESKRKYDLSGEDESVYERRAAARPGPGAARAYNGYYEADFDADEIFRNFFFGGMRPTATASFGGFSFGPGMGHRHADNDNHGSGGGFNARALIQLFPVLLILLINFLPSSEPIYTLSQSYPYEHRVTTPRGVNYYVKSTKFAQDYPEGTRERETVEDKVEREYFGILRQNCQFELQRRQWGYIKETPHCDILRKYELVN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5369 371 MobiDBLite consensus disorder prediction 44 102 - -
Lja1g5369 371 PANTHER - 1 368 - -
Lja1g5369 371 ProSiteProfiles dnaJ domain profile. 118 182 IPR001623 -
Lja1g5369 371 Pfam Domain of unknown function (DUF1977) 280 351 IPR015399 -
Lja1g5369 371 PRINTS DnaJ domain signature 138 153 IPR001623 -
Lja1g5369 371 PRINTS DnaJ domain signature 154 174 IPR001623 -
Lja1g5369 371 PRINTS DnaJ domain signature 120 138 IPR001623 -
Lja1g5369 371 SMART dnaj_3 117 174 IPR001623 -
Lja1g5369 371 ProSitePatterns Nt-dnaJ domain signature. 159 178 IPR018253 -
Lja1g5369 371 SUPERFAMILY Chaperone J-domain 85 178 IPR036869 -
Lja1g5369 371 MobiDBLite consensus disorder prediction 77 102 - -
Lja1g5369 371 CDD DnaJ 118 171 IPR001623 -
Lja1g5369 371 Gene3D DnaJ domain 114 233 IPR036869 -
Lja1g5369 371 PANTHER AT29763P-RELATED 1 368 - -
Lja1g5369 371 Pfam DnaJ domain 118 179 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5369 Lja-Chr1 88917616 88919909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5369 113 179 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.845 1.06e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5369 K09518 - gmx:100788812 470.314