Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5364 ATGGAGCAAACGCAGCTAGCTAGCAAGGGAAAGCGTGAAATACCAAAGATCAAATACAAAGTTTCAAGCCAAATGGAAGCGATGTTGTTGGGTTCATTAATGATTCTCATGATAAGTTTCATTATCGCGCAAGCTCAACTGAAAACTGGGTTTTACTCTTCTTCATGCCCAACCGCAGAGGCCACAGTGCGTTCCACTATTGAATCCTACTTCAATAAAGACCCAACCATTGCTCCTAGCCTGATTAGGCTTCATTTCCATGATTGCTTTGTTCAGGGCTGCGATGGTTCAGTTCTGATTGTAGGGTCATCTGCAGAGCGGAATGCATTGGCAAACCTTAGTCTAAGAGGTTTTGAAGTGATTGAAGATGCAAAATCACAACTTGAGGCAATATGCCCAGGTGTTGTCTCATGCGCTGACATACTAGCTGTGGCAGCACGTGATGCAGTGTACTTGAGTAATGGTCCAAGTTGGTCAGTTCCCACCGGAAGAAGAGATGGGAGGATATCTTCATCAGCGCAAGCCTCTAATTTGCCTTCCCCACTTGACCCTGTCTCAGTCCAGAGACAAAAATTTGCTGCCAAAGGCCTAGATGACCATGACCTTGTCACTCTAGTTGGCGCACATACCATAGGCCAGACAGAATGCAGATTCTTCAGCTACCGCCTGTATAATTTCACTACCACTGGGAATTCAGATCCAACTATAAATCAAGCAACCTTAGCACAATTTCAAGCACTTTGTCCCAAGAATGGAAATGGCTTGAGAAAGGTTTCATTGGATAGTGGTAGTCCAGCCAAATTTGATGTTAGTTTCTTCAAGAATGTGCGTGATGGTAATGGGGTTCTAGAGTCTGACCAGAGGCTGTGGGGAGATTCTGCTACACAAAGTGTAGTGCAGAGTTATGCTGGGAATATAAGAGGGTTGCTGGGGTTGAAATTTGCGTATGAATTTCCAAAGGCCATGATTAAATTGAGTAATATAGAGGTGAAGACCGATACAGAAGGAGAGATTAGAAAAGTTTGTTCAAAATTTAATTGA 1041 0.4352 MEQTQLASKGKREIPKIKYKVSSQMEAMLLGSLMILMISFIIAQAQLKTGFYSSSCPTAEATVRSTIESYFNKDPTIAPSLIRLHFHDCFVQGCDGSVLIVGSSAERNALANLSLRGFEVIEDAKSQLEAICPGVVSCADILAVAARDAVYLSNGPSWSVPTGRRDGRISSSAQASNLPSPLDPVSVQRQKFAAKGLDDHDLVTLVGAHTIGQTECRFFSYRLYNFTTTGNSDPTINQATLAQFQALCPKNGNGLRKVSLDSGSPAKFDVSFFKNVRDGNGVLESDQRLWGDSATQSVVQSYAGNIRGLLGLKFAYEFPKAMIKLSNIEVKTDTEGEIRKVCSKFN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5364 346 SUPERFAMILY Heme-dependent peroxidases 46 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 Pfam Peroxidase 63 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PANTHER PEROXIDASE 25-RELATED 32 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 Gene3D Peroxidase, domain 2 179 325 - -
Lja1g5364 346 Gene3D - 50 346 - -
Lja1g5364 346 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601
Lja1g5364 346 CDD secretory_peroxidase 46 345 IPR033905 GO:0004601|GO:0042744
Lja1g5364 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Lja1g5364 346 PANTHER PEROXIDASE 32 344 - -
Lja1g5364 346 MobiDBLite consensus disorder prediction 162 183 - -
Lja1g5364 346 ProSiteProfiles Plant heme peroxidase family profile. 46 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g5364 346 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5364 Lja-Chr1 88770966 88773002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5364 33 346 Peroxidase AT2G41480 68.239 9.90e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5364 K00430 - gmx:100816487 524.628