Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5340 ATGCATCTTGGAGAGATTGAGGCTGTTGTAATCGCCACTGGGCTGCTCACCTTCTTCGGTAAAGCTGCTCACTTGGTAGATAGCACTAACCAAGTTTGCCACTTCCAAAAGTGTGATGTGGGATGTGTTGAAAAGAATATGAAGTTCCAAGAAGGAAAAGTGGACAGAACCCAATGCCACATTTCCTCACTTGGTAAGGAAAAGTGGACAGAACCCAGTCTGCAAAGCACAGTCCTCACTGGTCCGGGGTATCTAGAACCCAATGTCACATTTCCTCACTGCAGTGGCACTTGA 294 0.4694 MHLGEIEAVVIATGLLTFFGKAAHLVDSTNQVCHFQKCDVGCVEKNMKFQEGKVDRTQCHISSLGKEKWTEPSLQSTVLTGPGYLEPNVTFPHCSGT* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5340 97 PANTHER PLASMA MEMBRANE ATPASE 3 38 - -
Lja1g5340 97 PANTHER CALCIUM-TRANSPORTING ATPASE 3 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5340 Lja-Chr1 86993402 86994134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5340 4 37 Primary Pumps ATPases AT2G18960 91.176 1.07e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5340 K01535 - lang:109350614 64.3142