Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5331 ATGGGGAAAAAAGGAGGAAGCTGGTTCTCGTCGGTGAGGAAAGTTTTCAAGTCATCATCATCATCATCATCTAAAGAGGAGAAGATCAAGAAGGAAATTAGCTGCAGGCATGAGGCGCCGGAAGTGGTTTCTTTTGAGCATTTTCCTGCAGAGAGTTCCATTGATGTCGACGACACAAACAACGAGGAGAGCATCACCACATCAACAACGCCTGTGACTGAAGATAGAGATCATGCCATTGCCGTTGCAGCAGCAACCGCCGAAGCGGCTGAAGCTGCTGTGGTGGCTGCTCAAGCTGCTGCTAGAGTTGTGAGATTGGCAGGTTATGGACGTCATTCCAAGGAAGAAAGAGCAGCAGCACTCATTCAATCATACTACAGAGGATACCTTGCTCGACGTGCTTTGCGTGCATTGAAGGGATTAGTGAGGCTGCAAGCACTGGTGAGGGGACATAACGTGCGCAAGCAAGCACAGATGACAATGCGGTGCATGCAAGCGTTAGTCCGGGTTCAGTCACGGGTGAGAGCTCGCCGAATCCAATTGAGTCATGATCAGAAGACAACACTGATGCTGGAGAAGGAGGAGGAACACCAAAGAATACAAGTTGTGAAGCAAGCAAAGCCTAAGCCCATGATGAGCCCCATGAGAAGGAGGTTAGACACTACTTCCATTAATGATTGGGATAATAAGCGTCATAGTAGCCAGAAAATAAAGGAAAATGATTTGAGGAAACATGAAGTTGTCATGAAGAGGGAGAGAGCTCTTGCATATGCTTTCAACTATCAACAGCAACAACAAAAGCAATTTTTGCAGCGAGAGCCTAATCACGATGATATAGGAACCTATTATTCCAATGAGCATGAAAAGGCCCAATGGGGTTGGAACTGGTTGGAGCATTGGATGTCATCACAACCATACCATGCTACTAGTACTAGGCACTTGGGGCAACTTGAGACCTCTTACATGACTCTTGCTTCTACAACTTCAACCACCACTGATAACATATCAGAGAAGACTGTAGAAATGGATATGGTTTCAACTCCAGGCCCAAGCAGCATCAACATGGGCCTCACGAACCAAGACTTTCATGACTCAAGCCTGTCTCCTTATAATAGGCAACATCAGAGACTGCCGAGCCCGAATAGACCTAGTTATATGGCCCCAACACAGTCTGCAAAGGCTAAGAGCCGTGTTCAAGGCCCAGGTAAGCCACAAGTTTCATTTGTGTCTCATAGTAACTCGTCAACAAAAGGTGGTTCTAATATCGGGTCAGGTTGTGATTCTTCAAGCTCAGGTGTAGGGAATACTACTCACCAATTTCTAAGTAGCCCAAGCCCAAAAGTTAATGGGATGCATTCACATTCTAGACGAAATCTGGGTGGTAGTCGTGATGATCTTGTTGAAGATTAG 1410 0.4617 MGKKGGSWFSSVRKVFKSSSSSSSKEEKIKKEISCRHEAPEVVSFEHFPAESSIDVDDTNNEESITTSTTPVTEDRDHAIAVAAATAEAAEAAVVAAQAAARVVRLAGYGRHSKEERAAALIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQSRVRARRIQLSHDQKTTLMLEKEEEHQRIQVVKQAKPKPMMSPMRRRLDTTSINDWDNKRHSSQKIKENDLRKHEVVMKRERALAYAFNYQQQQQKQFLQREPNHDDIGTYYSNEHEKAQWGWNWLEHWMSSQPYHATSTRHLGQLETSYMTLASTTSTTTDNISEKTVEMDMVSTPGPSSINMGLTNQDFHDSSLSPYNRQHQRLPSPNRPSYMAPTQSAKAKSRVQGPGKPQVSFVSHSNSSTKGGSNIGSGCDSSSSGVGNTTHQFLSSPSPKVNGMHSHSRRNLGGSRDDLVED* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5331 469 MobiDBLite consensus disorder prediction 345 469 - -
Lja1g5331 469 PANTHER IQ-DOMAIN 5-RELATED 1 447 - -
Lja1g5331 469 Pfam Protein of unknown function (DUF4005) 370 405 IPR025064 -
Lja1g5331 469 MobiDBLite consensus disorder prediction 20 34 - -
Lja1g5331 469 Gene3D - 112 167 - -
Lja1g5331 469 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Lja1g5331 469 SMART iq_5 114 136 IPR000048 GO:0005515
Lja1g5331 469 SMART iq_5 137 158 IPR000048 GO:0005515
Lja1g5331 469 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Lja1g5331 469 Pfam IQ calmodulin-binding motif 142 157 IPR000048 GO:0005515
Lja1g5331 469 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Lja1g5331 469 PANTHER IQ-DOMAIN 21 1 447 - -
Lja1g5331 469 MobiDBLite consensus disorder prediction 345 396 - -
Lja1g5331 469 MobiDBLite consensus disorder prediction 403 456 - -
Lja1g5331 469 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5331 Lja-Chr1 85638339 85643421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5331 1 420 IQD Protein Family AT3G49260 51.370 1.53e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5331 - - lja:Lj0g3v0214239.1 588.571