Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5321 ATGGATGAAACAGGTGAGGAGTGCAGGCGGTGCGGCAGAAAAGCGCCACCGGGGTGGAGATGCACGGAGAGGGCTCTGAGTGGAAAATCCGTGTGTGAGAGGCATTTTCTGTATAACCAGAAAAAAACTGAGAGGTGGAAGGAAGGTGCTTCTGGTATAACCCCTAAAAGGAGAAGCGGAAGAAGAAAACCTGTAGATAATTCAGAAAATGGGGTTGTTGATGATGGTTGTAAAGAGCTGTTTGGTGATCCAAATGGTACTCCCACTGTCGTTGACGAATTTACTGGGCTTTGTGGTGTATCTGAAGGGGATGCTGGAGTGAATCTTAATCTTGGTTGTGAAAGTCTTAACCTTCAGGACAAAGGAGAGGAGGGTCAACAAGTTCATTCTGGTGGATTTGGGGAAGGATGTGGACGTATGGGTCAGGTTCTTGGTGATTATGGAGTCGAATATGCTGAGGATAGAAATGCAGTTGCTGGTTTAGGTGCCTTTAGAAATGTTGGCAATGAAGATCATGGATGTGTGGCTGGTAGGAATGTTTGTGTAAATGATCGTCTTGGTCTTCCTTCTGAAGGAATAGAGAGCCTGATTGGTGAAGAACCAGGTTTTGGGAGTTTTCAAGCACTTCTTTGTAAAGACAGGGGTTGTGCAGAAGATGTGATTTTCATTGGTGATGTTACAGGCTTTGAGGGTTTGAGTGGTGAAAATACTCATGGATTTAGAGATGAAGTTGGTGGGTTTGTGGAAAATCCATGTTTTGAAGGTGAAAATGATAGTAACAAAGAGGGACCTGGGTCAAATTACAAGATGTCAGCTCTTGGCTTCGAAGAGGAAATAGGACTGTTATTAAGCCGAGGAGGTACCACCAATGAAGAGGCAAGATGTGAAGCATTGAGGCCACTGTCTAAAAGAGGCCGGCCTAAGGGTTCCAAGAATGAGAATGACAATAAACAGCTTAGCACCGCCTTGGATGGACAAAGTGTTGGTGGTGATGATAATGCAGGTACTATTGGAATGAGCAGTGTCACAGATTTAGGGATTGAAATTGCAGTTCTTTCAGGAGAGAAAGATAAGTCTAGTGATGAAGTTGCAGATCTGGGTGAGACTGCAAGGGCAGAGAAGAGTGGCCGACCAAAGGTTTCAAAGAACAAAATTAGGAGAGTTGAGCATGTTGGTAATGTAGTTGCTGTTAAGATTGTAGGACCAAAGAAGCATGGTAGGCCAAAAAGTTCAAAATGTAGAAAGAAAAATATCATGGAGGCTGGTGATGAAGCTGCTGGTGAGATTGGAGGAGATAAGAAGCTGGGTCGACCAAAGGGCTCATTAAATAAATTGAAGAATACTGTGGATTGTAACAATGAAGGTTCTGGTGCTGGTGAGATTGTAAGACCTAAAAAGCGTGGTAGACCAAGAGGTTCAAAGAATAAAGTAAACAATATTATGGAGGTTAGTAAAAAAGCTGCTAGTGGTGGTGACTGCAAGATTGCTGGACCTAAGAAGTGTGGTCGCCCAAAGGGTTCCAAAAATAAACAGAAGAATATTGTGCAGGTTAGTCAAGAAGTTGCCGGTTCTGCGGATTGTGAGATTGCAGGACCTAAGAAGTGTGGTCGACCAAAGGGTTCAATGAAGAAAAGGAAGTCCCTTGTGTGTGCTTCTATTCTTGAAGGAGCAGGTGGGATTACAAGGGAAGGTTTGGAAAATAAAATGCTGAGCAATCTGTGTCAGGAACATATTGAGTATACCCAACCAGTAGTTAGGGGTGGTCGACCTAAGGGCTCAAGGAACAAGAAGATAAAACTAGCATTTCAGGACATGGTTGATGAAGTTAGGTTTGCTAATAAAGAAAGTGATAAAGCAACTTGTGCTGTGGGTGAGGAACAGAAAGATCATGGAAGTGACATTGGTAAGCCAATTGGTTTGGACAATGACAAAGCCACTCTTGCTAGTGACAGGGACCAGGAAACACCTAACCAAACCCTTGCTCAAGATGAGGTTCAAAATGATAAAAGCTCTGTTAAACCAAAGCGCGGTCGACCAAAAGGATCTAAAAATAAGATGAAAAGCATTGCTAATAAAGCTAGAAACAAGTTTGGTAAGGTCAGAAATATGCGTGGTAGGCCAAAAGGTTCTCTTAGAAAGAAAAATGAGACTGCATATTGTTTGGATTCACAGAATGAGAGGAATAGTCTTGACGGAAGAACTTCTACTGAAGCTGCCTACAGAAATGATGTTGATCTACATAGAGGTCATTGTAGCCAAGAAGAACTACTGAGAATGTTGTCAGTCGAACACAAGAATATTCAGGGTGTTGGAGTTGAAGAAACTATAGACTATGGATTACGTTCTTCAGGATTGATGGGTGATACTGAAAGGAAAAAGGAGACGAGAATTTTAAGGTGCCACCAGTGCTGGCGGAATAGTTGGAGTGGAGTTGTCATTTGTGCCAAGTGCAAAAGAAAGCAATATTGTTATGAGTGCATAACAAAATGGTACCCCGGTAAAACTAGAGAGGAGATAGAGATTGCTTGTCCCTTTTGTCTTCGTAATTGCAATTGCCGATTGTGCTTGAAGAAAGATATATCTGTAATGACTGGGAGTGGTGAAGCTGATACAGGTGTCATATTACAAAAGTTGCTGTACTTGCTTAACAAAACTCTGCCCTTACTCCAACATATCCAACGGGAGCAGATATCAGAAATGGAAGTAGAAGCTAGCATGCATGGTTCCCCATTGATGGAAGAGGATATTCAATTGTCAGTGATTGATAATGATGATCGAGTTTATTGTGACAATTGCAATACATCCATTGTCAATTTCCACAGAAGTTGTCCCAATCCTAATTGTAGGTATGATCTTTGTCTCACTTGTTGCATGGAACTAAGAAACGGACTTCATTATGAAGATATTCCTGCTAGTGGTAATGAGGAAACCATTGATGAACCACCTATAACTTCTGCTTGGAGAGCAGAGATAAATGGTAGGATTCCTTGCCCTCCAAAAGCTAGAGGAGGTTGCGGTACTTCTATCCTTTCATTGAGGCGCCTTTTTGAAGCTAATTGGGTGAACAAGTTGGTTAGGAATGCGGAGGAGCTTACTATCCAATATCATCCACCTAGTGTTGATCTTTTGGTAGGGTGTTTACAGTGCCATAGGTTTGTGGTAGATCTGGCACAAAATTCTGTAAGGAAGGCAGCTTCTAGAGAAACAAATCATGATAACTTTTTGTACTGCCCGGATGCTGTTGACATGGGAGACACAGAATATGAGCATTTCCAAAGGCACTGGATAAGAGGTGAACCTGTTATAGTTAGGAATGTTTTTGAAAAGGCTAGTGGCCTTAGCTGGCACCCAATGGTGATGTGGAGAGCTTTTAGGGGGGCAAATAAGATATTAAAAGAGGAGCCAACTACTTTCAAAGCCATTGACTGCCTGGATTGGTGTGAGGTTCAAATTAACATCTTTCAGTTCTTCAAAGGCTACTTGGAAGGTCGTAGGTACAGAAATGGATGGCCAGAGATGCTGAAGCTAAAGGATTGGCCCCCATCAAATTCTTTTGAAGAGTGTTTTCCGAGGCATGGTGCCGAGTTCATAGCTATGCTTCCTTTTAGTGACTATACCCATCCCAAATTTGGTATTTTAAATCTTGCCACAAAGCTCCCTGCTGTTTTGAAGCCTGATTTGGGCCCCAAAACATACATTGCTTATGGATCTTTAGAAGAATTAAGCAGAGGTGATTCTGTGACAAAACTACATTGTGACATTTCAGATGCGGTCAATATTCTGACGCACACAGAGGAAGTAAAGGCACCACTATGGCAACCCAAAATTATAAAAAAATTACAGAAGAAGTATGAAGCTGAAGATATGCGCGATCTCTATGGTAGGATCAATAAGACAGTTGTTTCACATAGAAGTAAGCACAAAAAGTGTCGTACAGGTATTAGCATGGATCCTAAAATCCCTGAAAATGATGACACTATGGGAAGAAACTCAAACTTACGGGGAAGTCAAAGTAATGAAGAGATAGTAGTTAATGAACTGTCAACTAGATCCTCGAGTTTGGGAGAATCAAGATCAGATAGTGCAGCTTGTGTTCAAGGGTTCTCAGAATCCAGCGAAAGTAAATCAGTTTTAAATGCTGGAAAAGATTGTGAGTGGATGCATTATGACGTGAATAATGGGAAACAATGGTGCTCATCACCAGGTGATGGATCTTTTAAAGGAATTTCATTACAAGAAGATATGAAGTTTAAGACATGCACAGATGTCGATTATGAAAAAAGAAGAGTGATTGATGTGGACTTAAATAAAGAAAAGTTTTGTTTCAAAGATCATACAGGTTCCTTATTTGTTGATTTGAACTTCTCCACTCCACCAGCAAGGGTAAATCAGGAGCATCAGAGAAATTTTTCTGTTTGTGAAAATATGGCTGACAGTAATAGTATTTCTAAAGAAGGGACAGTTGTGGGTAATTTCTTCCCTCTAGATGAATCTCATGAACAAGATCTCGGTAATGATACTAAAAAAAATCCAAATGCCAGTGAATGTAATCAGCCTTGTACTGGAAAAGGAGAAACAATTTTTTTCAATAGATCGAGTTCTTCAGTCATGCCATGTTCAAAGATCCAGATCGACAAAACTGTGCCAGTTAAAAATGACATATCGAGTAATAATTTCTTTCAAAATGATGATCATATGGAGACTCAATTTGGGAGTGCTGTGTGGGACATATTCCGCAGACAGGATGTACCTAAACTAACCGAGTACCTCAAGAAGCACCATAAAGAATTTCGCCACGCTAATAATCTTCCAGTTGATTCTGTGACCCATCCCATTCATGACCAGATCCTTTATCTAAATGAGAAGCATAAAAGACAGCTTAAGAAAGAGTATGGCATTGAACCATGGACGTTTGAGCAACACCTTGGCGAGGCTGTTTTCATACCTGCAGGGTGCCCACATCAAGTGAGAAATAGAAAGTCTTGCATGAAAGTGGCTCTGGACTTTGTTTCACCTGAGAATGTTCAGGAATGCGTTCGATTGACAGAGGAATTTCGAATGCTTCCGAAAGGCCATAGATCTAAGGAAGATAAATTGGAGATAAAGAAGATGGCACTGTATGCCACTGATATTGCCATAACAGAAGCTACAAAACTGATGGGAGCTAAATGA 5172 0.4118 MDETGEECRRCGRKAPPGWRCTERALSGKSVCERHFLYNQKKTERWKEGASGITPKRRSGRRKPVDNSENGVVDDGCKELFGDPNGTPTVVDEFTGLCGVSEGDAGVNLNLGCESLNLQDKGEEGQQVHSGGFGEGCGRMGQVLGDYGVEYAEDRNAVAGLGAFRNVGNEDHGCVAGRNVCVNDRLGLPSEGIESLIGEEPGFGSFQALLCKDRGCAEDVIFIGDVTGFEGLSGENTHGFRDEVGGFVENPCFEGENDSNKEGPGSNYKMSALGFEEEIGLLLSRGGTTNEEARCEALRPLSKRGRPKGSKNENDNKQLSTALDGQSVGGDDNAGTIGMSSVTDLGIEIAVLSGEKDKSSDEVADLGETARAEKSGRPKVSKNKIRRVEHVGNVVAVKIVGPKKHGRPKSSKCRKKNIMEAGDEAAGEIGGDKKLGRPKGSLNKLKNTVDCNNEGSGAGEIVRPKKRGRPRGSKNKVNNIMEVSKKAASGGDCKIAGPKKCGRPKGSKNKQKNIVQVSQEVAGSADCEIAGPKKCGRPKGSMKKRKSLVCASILEGAGGITREGLENKMLSNLCQEHIEYTQPVVRGGRPKGSRNKKIKLAFQDMVDEVRFANKESDKATCAVGEEQKDHGSDIGKPIGLDNDKATLASDRDQETPNQTLAQDEVQNDKSSVKPKRGRPKGSKNKMKSIANKARNKFGKVRNMRGRPKGSLRKKNETAYCLDSQNERNSLDGRTSTEAAYRNDVDLHRGHCSQEELLRMLSVEHKNIQGVGVEETIDYGLRSSGLMGDTERKKETRILRCHQCWRNSWSGVVICAKCKRKQYCYECITKWYPGKTREEIEIACPFCLRNCNCRLCLKKDISVMTGSGEADTGVILQKLLYLLNKTLPLLQHIQREQISEMEVEASMHGSPLMEEDIQLSVIDNDDRVYCDNCNTSIVNFHRSCPNPNCRYDLCLTCCMELRNGLHYEDIPASGNEETIDEPPITSAWRAEINGRIPCPPKARGGCGTSILSLRRLFEANWVNKLVRNAEELTIQYHPPSVDLLVGCLQCHRFVVDLAQNSVRKAASRETNHDNFLYCPDAVDMGDTEYEHFQRHWIRGEPVIVRNVFEKASGLSWHPMVMWRAFRGANKILKEEPTTFKAIDCLDWCEVQINIFQFFKGYLEGRRYRNGWPEMLKLKDWPPSNSFEECFPRHGAEFIAMLPFSDYTHPKFGILNLATKLPAVLKPDLGPKTYIAYGSLEELSRGDSVTKLHCDISDAVNILTHTEEVKAPLWQPKIIKKLQKKYEAEDMRDLYGRINKTVVSHRSKHKKCRTGISMDPKIPENDDTMGRNSNLRGSQSNEEIVVNELSTRSSSLGESRSDSAACVQGFSESSESKSVLNAGKDCEWMHYDVNNGKQWCSSPGDGSFKGISLQEDMKFKTCTDVDYEKRRVIDVDLNKEKFCFKDHTGSLFVDLNFSTPPARVNQEHQRNFSVCENMADSNSISKEGTVVGNFFPLDESHEQDLGNDTKKNPNASECNQPCTGKGETIFFNRSSSSVMPCSKIQIDKTVPVKNDISSNNFFQNDDHMETQFGSAVWDIFRRQDVPKLTEYLKKHHKEFRHANNLPVDSVTHPIHDQILYLNEKHKRQLKKEYGIEPWTFEQHLGEAVFIPAGCPHQVRNRKSCMKVALDFVSPENVQECVRLTEEFRMLPKGHRSKEDKLEIKKMALYATDIAITEATKLMGAK* 1724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5321 1723 MobiDBLite consensus disorder prediction 1325 1340 - -
Lja1g5321 1723 Gene3D Cupin 1526 1695 - -
Lja1g5321 1723 Gene3D Cupin 1073 1327 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 297 313 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 1307 1340 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 356 379 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 651 667 - -
Lja1g5321 1723 SMART cupin_9 1189 1686 IPR003347 -
Lja1g5321 1723 ProSiteProfiles WRC domain profile. 2 49 IPR014977 -
Lja1g5321 1723 SUPERFAMILY Clavaminate synthase-like 1087 1716 - -
Lja1g5321 1723 ProSiteProfiles JmjC domain profile. 1196 1686 IPR003347 -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 620 714 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 456 475 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 314 336 - -
Lja1g5321 1723 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 984 1721 IPR045109 GO:0032454|GO:0033169
Lja1g5321 1723 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 327 975 IPR045109 GO:0032454|GO:0033169
Lja1g5321 1723 MobiDBLite consensus disorder prediction 44 69 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 297 336 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 620 637 - -
Lja1g5321 1723 Pfam JmjC domain, hydroxylase 1564 1669 IPR003347 -
Lja1g5321 1723 SMART AT_hook_2 303 313 IPR017956 GO:0003677
Lja1g5321 1723 SMART AT_hook_2 402 414 IPR017956 GO:0003677
Lja1g5321 1723 SMART AT_hook_2 532 544 IPR017956 GO:0003677
Lja1g5321 1723 SMART AT_hook_2 673 685 IPR017956 GO:0003677
Lja1g5321 1723 SMART AT_hook_2 498 510 IPR017956 GO:0003677
Lja1g5321 1723 SMART AT_hook_2 464 476 IPR017956 GO:0003677
Lja1g5321 1723 SMART AT_hook_2 432 444 IPR017956 GO:0003677
Lja1g5321 1723 MobiDBLite consensus disorder prediction 356 382 - -
Lja1g5321 1723 MobiDBLite consensus disorder prediction 676 708 - -
Lja1g5321 1723 ProSiteProfiles Zinc finger RING-type profile. 800 846 IPR001841 -
Lja1g5321 1723 PANTHER ENBP1 PROTEIN 984 1721 - -
Lja1g5321 1723 PANTHER ENBP1 PROTEIN 327 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5321 Lja-Chr1 84073392 84103138 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lja1g5321 JmjC 5.4e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5321 K15601 - lja:Lj1g3v0725870.1 3206