Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5311 ATGAAACTTCTCTCTATAAACAAGTCAAGAACCTGCAGAAGATCCAATTTCCCTCCTGGCCCTCCTACCCTACCCATCATTGGAAATCACCACCAGTTAGGAACCATGCCCCACCTATCTCTTCAAGGCCTTGCTGAGAAATATGGACCCATAATTTTCCTCCAACTTGGTGAAATCCCAACAGTCGTTGTTTCATCAGCTAGAATTGCAAAAGAGGTGTTGAAGACCCATGACCTTGCACTTGCAAACCGCCGACAACTATTTTCAGCTAAGTACCTCTTTTACAACTGGACAGACATTCTTCTCAGTGCTAAAAGGGTACAATCATACAGTTCTGTTAGAGAAGAAGAAGTTAGTCGTCTGGTTCATCGGATTTTGAATCAGTATGCAAACAATGTCCTTTGCAGGGTAGCATTTGGAAGGGACTTTTCTGAAGGAGGAGACAATCAACGATTTGGGTTCCAAAAGATGCTTGATGAGTACCAGGAACTACTTGGTGGATTCAGTTTTGGGGACTTCTTTCCTTCCTTGGAGTTCATGCACAGCTTGACGGGAATGAAATCAAGACTTGAAGACACTTCTCAAAGATTTGATCAACTCATTGATCAGATACTGAATGAACACTTGGCTTCAGATAAAGTAGAGGAGCATAAGGACCTAGTGGATGTTTTGCTTGAGGTGCAGAAGAATGATTCGGGTGAGATGCCTCTCACCACTGATAACATCAAGGCAATCATCTTGGACATGTTTGCTGCAGGAACTGATACAACCTTCATTACCCTTGATTGGGCAATGACAGAGCTGCTAATGAATCCTCATATTATGGAAAAAGCTCAAAACGAAGTGCGGAGCATCCTGGGAGAAAAAAGAGTTGTTGCAGAGAGTGATCTGCAACAACTACACTACATGATTCCAATTCTAGTCCCAAGGGAATCCATGGAAGATGTTATCATAGACGGGTACAAAATTCCAGCTAGAACAAGAATTTTTGTGAATGCTTGGGCAGTAGGAAGGAACCCAGAAAGTTGGGAAGATCCTAGTGTATTTAAACCAGAGAGGTTTCTAAAGAGTAATATTGACTTCAGGGTGGGACAGGACTTTGAGCTGATACCATTTGGGGCTGGTAGAAGAGGTTGTCCGGCTATTGCATTCGGCGTTGCGGTTGTTGAGCTTGCTCTAGCTCAACTCCTCTATAGCTTCAATTGGGAGCTTCCTCCTGGTGTTGCACCCAAAGACTTGGACCTCACTGAAGTTTTCGGCATCTCAATGCACAGGAGCGAAAATCTCCATGTTTTTGCTAACCCTTACTTTCTATGA 1317 0.4343 MKLLSINKSRTCRRSNFPPGPPTLPIIGNHHQLGTMPHLSLQGLAEKYGPIIFLQLGEIPTVVVSSARIAKEVLKTHDLALANRRQLFSAKYLFYNWTDILLSAKRVQSYSSVREEEVSRLVHRILNQYANNVLCRVAFGRDFSEGGDNQRFGFQKMLDEYQELLGGFSFGDFFPSLEFMHSLTGMKSRLEDTSQRFDQLIDQILNEHLASDKVEEHKDLVDVLLEVQKNDSGEMPLTTDNIKAIILDMFAAGTDTTFITLDWAMTELLMNPHIMEKAQNEVRSILGEKRVVAESDLQQLHYMIPILVPRESMEDVIIDGYKIPARTRIFVNAWAVGRNPESWEDPSVFKPERFLKSNIDFRVGQDFELIPFGAGRRGCPAIAFGVAVVELALAQLLYSFNWELPPGVAPKDLDLTEVFGISMHRSENLHVFANPYFL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5311 438 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS E-class P450 group I signature 45 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS E-class P450 group I signature 69 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS E-class P450 group I signature 241 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS E-class P450 group I signature 291 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS E-class P450 group I signature 332 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS E-class P450 group I signature 261 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS E-class P450 group I signature 379 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 Pfam Cytochrome P450 18 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 Pfam Cytochrome P450 122 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 436 - -
Lja1g5311 438 Gene3D Cytochrome P450 3 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS P450 superfamily signature 252 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PRINTS P450 superfamily signature 370 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 372 381 IPR017972 GO:0005506|GO:0016705
Lja1g5311 438 SUPERFAMILY Cytochrome P450 18 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5311 438 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5311 Lja-Chr1 82358198 82367887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5311 19 429 Cytochrome P450 AT3G26310 40.781 5.67e-117 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5311 - - lang:109326078 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5311 1 82358198 82367887 Lja1g5311 1 82358198 82367887 ECH