Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5271 ATGATGATGGAGATTGAATCCAAGTGGGTGGTCCTCATGGCCATTGCTGTTTTGATGTTGAGATACCTTCTCAAGAATGTAAATTGGTGGTTGTATGAATCGAAATTGGGTAAGAAGCAGTACTCACTGCCCCCTGGTGACATGGGCTGGCCCTTCATTGGCAACATGTGGTCTTTCCTTAGAGCTTTCAAGTCCAAAAACCCTGATTCTTTCATGTCCTCCATTGTCTCTAGATATGGACGAATCGGAATATACAAGGCCTTCATGTTTGGGAACCCAAGTGTGATTGTGACAACCCCTGAAGCATGCAAGAGAGTTCTGACAGATGACACTAAATTTGAACCTGGTTGGCCTCGCTCTACACTAGAACTCATGGGAAAGAAGTCATTCGTGTCAATTGAGTATGAAGAACACAAGCGTCTCAGGCGCCTGACATCGTCTTCAATCAATGGCATGGAAGCATTGTCTCTGTACTTGACATACATTGAAGAAAATGTTATAAGTTCCTTGGAGAAATGGTCAAACATGGGAGAAATTGAATTCTTAACTCAGATGCGGAAGCTTACTTTTAAAATCATCATGCATATTTTCATTAGCTCAGAAAGTGAACATGTCATGGAGGCTTTGGAAAGAGAATACACTCAACTTAACCAAGGAGTTAGAGCCATGCGGATTAATATTCCTGGATTGGCATACCGCAAGGCATTCAAGGCGAGGAAAAAGCTACTTGCCATATTCCAATCTATTGTGGACGAGAGAAGAGAGCAAAGGAAGACATTTGTACCAAAAAATTCCAAAGATATGATGGATGCTCTGATTGATGTTGAAGATGATAAAGGGAGAAAGTTGAGTGATGAGGAAATCATTGATATCATGTTGATGTACTTGAATGCTGGTCATGAATCTTCAGGACATATCACCATGTGGGCGACCTATTTCCTGCAAAAGCACCCAGAATATCTCCAAAAGGCTAAGGCAGAACAAGAAGAAATAATAAAGAAAAGGCCTCCAACACAGAAAGGGTTGACTCTTAAGGAAATTCGACAGATGGAATTTCTTTATAAGGTGATTGATGAAACATTGCGTGTGATTACATTCTCACTTGTGGTATTTCGAGAGGCAAAGTCTGATGTCAATATAAATGGTTACATCATTCCAAAAGGTTGGAAAGTGTTGGTTTGGTTTAGATCGGTTCATCTTGATCCTGAAATATATCCTGATCCAATGCAATTTAATCCTAATAGATGGAATGAACACAAGGCTGGGGAATTCCTTCCCTTTGGAGCAGGAACTAGATTGTGTCCAGGCAATGATCTAGCCAAGATGGAAATTGCAGTTTTTCTTCATCATTTCATCATGAATTACCAGCTTGAACAAGTTAATCCTGAATGCCAAGTGAGATACTTGCCTCATACAAGGCCCATGGACAATTGCTTGGCAAGGATCAGGAAATTGATGATGATAGAGATTGAATCCAAGTGGGTGGTCCTCATGGCCATTGCTGTTTTGATGTTGAGATACCTTCTCAAGAATGTAAATTGGTGGTTGTATGAATCGAAATTGGGTAAGAAGCAGTACTCACTGCCCCCTGGTGACATGGGCTGGCCCTTCATTGGCAACATGTGGTCTTTCCTTAGAGCTTTCAAGTCCAGGGACCCTGATTCCTTCATGTCCTCCATTGTCTCTAGATATGGACGAATCGGAATATACAAGGCCTTCATGTTTGGGAACCCAAGTGTGATTGTGACAACCCCTGAAGCATGCAAGAGAGTTCTGACAGATGACACTAAATTTGAACCTGGTTGGCCTCGCTCTACACTAGAACTCATGGGAAAGAAGTCATTCGTGTCAATTGAGTATGAAGAACACAAGCGTCTCAGGCGCCTGACATCGTCTTCAATCAATGGCATGGAAGCATTGTCTCTGTACTTGACATACATTGAAGAAAATGTTATAAGTTCCTTGGAGAAATGGTCAAACATGGGAGAAATTGAATTCTTAACTCAGATGCGGAAGCTTACTTTTAAAATCATCATGCATATTTTCATTAGCTCAGAAAGTGAACATGTCATGGAGGCTTTGGAAAAAGAATACACTCAACTTAACCAAGGAGTTAGAGCCATGCAGATTAATATTCCTGGATTTGCATACCACAAGGCATTCAAGCTACTTGCCATATTCCAATCAATTGTGGACGAGAGAAGAGAGCAAAGGAAGACATTTGTACCAAAAAATTCCAAAGATATGATGGATACTCTGATTGATGTTGAAGATGATAAAGGGAGAAAGTTGAGTGATGAGGAAATCATTGATATCATGTTGATGTACTTGAATGCTGGTCATGAATCTTCAGGACATATCACCATGTGGGCGACCTATTTCCTGCAAAAGCACCCAGAATATCTCCAAAAGGCTAAGGCAGAACAAGAAGAAATAATAAAGAAAAGGCCTCCAACACAGAAAGGGTTGACTCTTAAGGAAATTCGACAGATGGAATTTCTTTATAAGGTGGTTGATGAAACATTGCGTGTGATTACATTCTCACTTGTGGTATTTCGAGAGGCAAAGTCTGATGTCAATATAAATGGTTACATCATTCCAAAAGGTTGGAAAGTGTTGGTTTGGTTTAGATCGGTTCATCTTGATCCTGAAATATATCCTGATCCAATGCAATTTAATCCTAATAGATGGAATGAACACAAGGCTGGGGAATTCCTTCCCTTTGGAGCAGGAACTAGATTGTGTCCAGGCAATGATCTAGCCAAGATGGAAATTGCAGTTTTTCTTCATCATTTCATCATGAATTACCAGCTTGAACAAGTTAATCCTGAATGCCGAGTGAGATACTTGCCTCATACAAGGCCCATGGACAATTGCTTGGCAAGGATCAGGAAATGTTCACCTACATCAACCTAA 2916 0.4064 MMMEIESKWVVLMAIAVLMLRYLLKNVNWWLYESKLGKKQYSLPPGDMGWPFIGNMWSFLRAFKSKNPDSFMSSIVSRYGRIGIYKAFMFGNPSVIVTTPEACKRVLTDDTKFEPGWPRSTLELMGKKSFVSIEYEEHKRLRRLTSSSINGMEALSLYLTYIEENVISSLEKWSNMGEIEFLTQMRKLTFKIIMHIFISSESEHVMEALEREYTQLNQGVRAMRINIPGLAYRKAFKARKKLLAIFQSIVDERREQRKTFVPKNSKDMMDALIDVEDDKGRKLSDEEIIDIMLMYLNAGHESSGHITMWATYFLQKHPEYLQKAKAEQEEIIKKRPPTQKGLTLKEIRQMEFLYKVIDETLRVITFSLVVFREAKSDVNINGYIIPKGWKVLVWFRSVHLDPEIYPDPMQFNPNRWNEHKAGEFLPFGAGTRLCPGNDLAKMEIAVFLHHFIMNYQLEQVNPECQVRYLPHTRPMDNCLARIRKLMMIEIESKWVVLMAIAVLMLRYLLKNVNWWLYESKLGKKQYSLPPGDMGWPFIGNMWSFLRAFKSRDPDSFMSSIVSRYGRIGIYKAFMFGNPSVIVTTPEACKRVLTDDTKFEPGWPRSTLELMGKKSFVSIEYEEHKRLRRLTSSSINGMEALSLYLTYIEENVISSLEKWSNMGEIEFLTQMRKLTFKIIMHIFISSESEHVMEALEKEYTQLNQGVRAMQINIPGFAYHKAFKLLAIFQSIVDERREQRKTFVPKNSKDMMDTLIDVEDDKGRKLSDEEIIDIMLMYLNAGHESSGHITMWATYFLQKHPEYLQKAKAEQEEIIKKRPPTQKGLTLKEIRQMEFLYKVVDETLRVITFSLVVFREAKSDVNINGYIIPKGWKVLVWFRSVHLDPEIYPDPMQFNPNRWNEHKAGEFLPFGAGTRLCPGNDLAKMEIAVFLHHFIMNYQLEQVNPECRVRYLPHTRPMDNCLARIRKCSPTST* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5271 971 Coils Coil 206 226 - -
Lja1g5271 971 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 PANTHER ENT-KAURENOIC ACID OXIDASE 2 499 966 - -
Lja1g5271 971 PANTHER ENT-KAURENOIC ACID OXIDASE 2 15 478 - -
Lja1g5271 971 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 908 917 IPR017972 GO:0005506|GO:0016705
Lja1g5271 971 Gene3D Cytochrome P450 33 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 Gene3D Cytochrome P450 518 966 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 SUPERFAMILY Cytochrome P450 39 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Lja1g5271 971 SUPERFAMILY Cytochrome P450 524 964 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 Pfam Cytochrome P450 529 940 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 Pfam Cytochrome P450 44 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5271 971 Coils Coil 691 711 - -
Lja1g5271 971 PANTHER CYTOCHROME P450 26 499 966 - -
Lja1g5271 971 PANTHER CYTOCHROME P450 26 15 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5271 Lja-Chr1 80104397 80131759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5271 494 963 Cytochrome P450 AT1G05160 67.505 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5271 K04123 - gmx:100781238 830.861