Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5251 ATGGCTCTACAATATCTGAAGTCATTTCTGAAGCGAGTGCCTCATGACCCAAATGATATCCTTTTCATGTTTGTTTTATCTTTCATCAGCATGCTGCTGCTGTTGTTTAAGCTCCCTAGAGGAAGCAAAAGGAACCTTCCTCCATCTCCACCAAAATTGCCATTCATTGGCAATTTCCATCAATTAGGAACAATTCCTTATCGCTCTTTTCAAACTCTCTCGCAAAAGTACGGTCCTTTGTTGTTGCTGCATCTGGGTCATCTTCCCCTGTTGGTGGTTTCCTCTGCAGACATGGCCAGAGAAGTGATGCAAACCCATGACACAGTTTTTTCAAGCCGACCCCACCTCACATCAACAAAAGCCTTACTCTACGGGTGCAATGACATAGGATTTGCGTCCTACGGTGATGCGTGGAGACAGAAAAGGAAACTTTGTGTGCTTGAATTACTGAGCCTTAAAAGGGTGCAGTCTTTTCAGTTTATCAGAGAAGAGGAAGTAGCAGCTTTGGTTGAGAAAATACGCAGTAATGGTACTTGCTCTGTGAACCTTAGGGAGATACTTATTGCAACCACAAACAACATAATTTGCAGGTGTGTTTTCGGAAGAAAATATGATGTTAAAGGTTGCAGTTTCGGACCGCTTGTGGCAAAGATGATGACTCAACTTTCTAATTTCAGTGTGGGGGATTTGTATCCTTTGTTGGGTTGGGTTGACGTTCTCACTGGCCAGATTAAAAAATTCAAGGCCACTTTTGAAGAATTGGATGCTTTTTTTGATAATGTAATTGCAGAGCGTAAGATGGAAAGGAGGTATTTTGAGAAGAAAAAAGACTTCCTTGATATTCTCCTTCAACTGCAGGAAGGGGGCATGTCAGAGTTTGAGCTCACCCAAGATGACTTGAAGGCTCTCTTACTGGACATGTTTTTGGCAGGAACTGACACATCTTCAACAACATTAGAATGGGCTATGGCAGAGCTGGTGAAAAATCCAGCCACAATGAAGAAAGTCCAAGAAGAGGTAAGAAGAGTTGTGGGGAGTAAATCAAGAATTGAGGACAGTGATGTAAATCAAATGGAGTACATGAAATGTGTCGTCAAAGAAACTCTTAGGTTGCACCCAGCAGCTCCTCTTTTGGTTCCTAGAGAAACAATTTCTAGTGTTAAGCTCGGAGGGTATGATATTCCTAGTAAAACAATGGTATATATCAACGCATGGGCAATTCAAAGGGACCCTGAGTTGTGGGAAAGGCCAGAAGTGTTCATACCTGAGAGATTTGAAAACAGCAAGGTTAATTTCAATGGTCAAGACTTTCAATTTATCCCCTTTGGTTCTGGGAGAAGAAAATGCCCTGGTGTGACATTTGGGCTTGCTTCCACCGAGTACCAGCTTGCTAATCTTTTATGTTGGTTTGATTGGAAGTTACCTACAAGTGTTCAAGATCTAGACATGAGTGAAAAATTTGGGCTCAATGTGAACAGAAAAGTTCCTCTCTATCTCGAACCAATACCATACAACAGTATCTGA 1524 0.418 MALQYLKSFLKRVPHDPNDILFMFVLSFISMLLLLFKLPRGSKRNLPPSPPKLPFIGNFHQLGTIPYRSFQTLSQKYGPLLLLHLGHLPLLVVSSADMAREVMQTHDTVFSSRPHLTSTKALLYGCNDIGFASYGDAWRQKRKLCVLELLSLKRVQSFQFIREEEVAALVEKIRSNGTCSVNLREILIATTNNIICRCVFGRKYDVKGCSFGPLVAKMMTQLSNFSVGDLYPLLGWVDVLTGQIKKFKATFEELDAFFDNVIAERKMERRYFEKKKDFLDILLQLQEGGMSEFELTQDDLKALLLDMFLAGTDTSSTTLEWAMAELVKNPATMKKVQEEVRRVVGSKSRIEDSDVNQMEYMKCVVKETLRLHPAAPLLVPRETISSVKLGGYDIPSKTMVYINAWAIQRDPELWERPEVFIPERFENSKVNFNGQDFQFIPFGSGRRKCPGVTFGLASTEYQLANLLCWFDWKLPTSVQDLDMSEKFGLNVNRKVPLYLEPIPYNSI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5251 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Lja1g5251 507 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 Pfam Cytochrome P450 47 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 Gene3D Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 19 504 - -
Lja1g5251 507 SUPERFAMILY Cytochrome P450 47 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g5251 507 PANTHER CYTOCHROME P450 71B11-RELATED 19 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5251 Lja-Chr1 79136658 79138521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5251 22 502 Cytochrome P450 AT5G25180 41.837 1.05e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5251 K20617 - jre:108986006 605.134