Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5122 ATGGCGGCTGCAGATTCTTCGTCTCCCCGTGAGGAGAATGTTTACCTGGCCAAGTTGGCGGAGCAGGCAGAGCGGTATGAGGAGATGGTGGAGTTCATGGAGAAGGTTGCCAAGTCGGTGGACGCTGAGGAGTTGACGAATGTGATTGGGGCGAGGAGGGCTTCCTGGAGGATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCAGAGGGAATGAGGACCATGTCTCTGTTATCAAGGAGTACAGGGGAAAGATTGAGGCTGAGCTCAGCAAGATCTGTGATGGAATTTTGAATCTCCTTGAGTCCAATCTCATACCATCTGCTGCGGCCCCTGAGTCTAAGGTGTTTTACCTTAAAATGAAAGAAGCTGCAGAAAGTACTTTGTTAGCTTACAAATCAGCTCAGGATATTGCTCTTGCTGAACTTGCCCCCACCCACCCGATTAGGCTCGGTCTTGCACTCAACTTTTCTGTGTTCTACTATGAAATCCTTAACTCGCCAGATCGTGCTTGTAATCTTGCGAAGCAGGCATTTGATGAGGCGATTTCTGAGCTTGACACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAGCTTCTCCGAGATAATCTGACTTTGTGGACGTCCGACATTACGGATGATGCTGGAGATGAGATCAAGGAAACATCTAAGCCACAATCAGGCGATGGGGAGCAATAA 708 0.4873 MAAADSSSPREENVYLAKLAEQAERYEEMVEFMEKVAKSVDAEELTNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRGKIEAELSKICDGILNLLESNLIPSAAAPESKVFYLKMKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETSKPQSGDGEQ* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5122 235 SMART 1433_4 10 224 IPR023410 -
Lja1g5122 235 PIRSF 14-3-3 4 223 IPR000308 -
Lja1g5122 235 ProSitePatterns 14-3-3 proteins signature 2. 193 212 IPR023409 -
Lja1g5122 235 Gene3D - 1 224 IPR036815 -
Lja1g5122 235 Pfam 14-3-3 protein 121 211 IPR023410 -
Lja1g5122 235 Coils Coil 16 43 - -
Lja1g5122 235 PANTHER 14-3-3-LIKE PROTEIN GF14 PSI 8 230 - -
Lja1g5122 235 PRINTS 14-3-3 protein zeta signature 184 213 IPR000308 -
Lja1g5122 235 PRINTS 14-3-3 protein zeta signature 32 61 IPR000308 -
Lja1g5122 235 PANTHER 14-3-3 PROTEIN 8 230 IPR000308 -
Lja1g5122 235 SUPERFAMILY 14-3-3 protein 9 213 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5122 Lja-Chr1 74074486 74076453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5122 7 234 14-3-3 family AT3G02520 77.519 1.36e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5122 K06630 - gmx:547889 400.208