Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5075 ATGAAAGAAATATGTGGTGCTAATTTTGGCAAGAGAATGATTAAGGCAAAGCCTTATTTGTTAACTGTGGGGCTGCAGTTTGGGTTTGCAGGAGCATACATCATTTCCATGGCCAGTATCAACCATGGAATGAATCGTTTTGTGTTCATTGTTTATCGCAATGTCATTGCTGCAATTGCTCTGGCTCCTTTTGCACTGATTTTTGAAAGGAAAGTTAGGCCAAAGATGACAATCTCTGTCTTTATGCAGATAATGGCGCTCGCATTTTTGGAGCCAGTGATTGATCAAGGGTTCACTTTCTTGGGAATGCAATATACTTCAGCATCCTTTGCATCTGCTATGATGAATGCTGTGCCCTCCGTCACCTTTGTGCTAGCTTTAATTCTCAGATTAGAGCGTGTAAATCTTAAGCAGATACAAGGCATAGCTAAGGTGATTGGGACGTTGGTTACATTTGGAGGGGCATTAGTAATGACACTTTACAAAGGCCCTCTTATTAACCTTTTGAGTTCTTCAAAAACAAGCCACCACCAAAATGGAACTCACTCCCCTCAGAGTCCCAGGCACTGGATCTCAGGGACTCTCTTTCTGCTCCTTGGTTGTTTGGCTTGGTCATCCTTCTTCATTTTACAGTCGGTGACATTGAAAAGGTATCCGGCGGAAATATCACTGTCCTGCTTGATATGCACTATGGGTGCTTTGCAAGGACTGGTGGTGGCACTGGTGGCGGGGCATCACTCTGGGGTTGCGGCATGGGCCATCGGTTGGGACTTTAGGCTCTATGGTCCTCTATACTTGGGAATAGTTACCTCAGGAATCACGTATTATGTGCAAGGTGTAGTATTGCAAAGCAGAGACCCAGTATTCTTAACAGCGTTTAGTCCCCTTTGCATGATCATCACTTCTGCTTTAGGCTACTTCATTTTGGCAGAGCAACTTCACTTGGGCAGTATCATTGGAGCCATTGTTATCGTCATGGGTCTTTATTTTGTGATGTGGGGCAAAGGCAAAGAGCATTCAGACACCAAGTTACAATCACCTACAACTAAGCAAACAGAGACACAGCAGCTTCCAATTACCTCATCTGATAACTAA 1095 0.4402 MKEICGANFGKRMIKAKPYLLTVGLQFGFAGAYIISMASINHGMNRFVFIVYRNVIAAIALAPFALIFERKVRPKMTISVFMQIMALAFLEPVIDQGFTFLGMQYTSASFASAMMNAVPSVTFVLALILRLERVNLKQIQGIAKVIGTLVTFGGALVMTLYKGPLINLLSSSKTSHHQNGTHSPQSPRHWISGTLFLLLGCLAWSSFFILQSVTLKRYPAEISLSCLICTMGALQGLVVALVAGHHSGVAAWAIGWDFRLYGPLYLGIVTSGITYYVQGVVLQSRDPVFLTAFSPLCMIITSALGYFILAEQLHLGSIIGAIVIVMGLYFVMWGKGKEHSDTKLQSPTTKQTETQQLPITSSDN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5075 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 147 - -
Lja1g5075 364 MobiDBLite consensus disorder prediction 340 364 - -
Lja1g5075 364 PANTHER WAT1-RELATED PROTEIN 12 358 IPR030184 GO:0016021|GO:0022857
Lja1g5075 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 337 - -
Lja1g5075 364 MobiDBLite consensus disorder prediction 345 364 - -
Lja1g5075 364 Pfam EamA-like transporter family 192 332 IPR000620 GO:0016020|GO:0016021
Lja1g5075 364 Pfam EamA-like transporter family 29 147 IPR000620 GO:0016020|GO:0016021
Lja1g5075 364 PANTHER WAT1-RELATED PROTEIN 12 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5075 Lja-Chr1 72584823 72589220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5075 10 364 Nodulin-like Gene Family AT4G08300 49.020 1.80e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5075 - - gmx:100812537 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5075 1 72584823 72589220 Lja1g5075 1 72584823 72589220 ECH