Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5073 ATGGAGGAGCAAAATGGTAGCAAAATGGGTTTTCTTCACAAGGTGAAGCCTTACCTTGCAATAGTGTCCCTTCAGTTTGGCTACTCTGGGATGTATGTCATCACCATGGTTTCTTTCAAACATGGCATGAGCCATTGGATACTCTCTGTGTACCGTCATGTAGTTGCCCTCATCATTATAGCTCCTTTTGCCTTTGTCCTTGAAAGAAAAATAAGGCCAAAGATGACTCTTCCCATCTTCCTCAGGATAGTGGCGCTTGGGTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGTATGAAGATGACCTCAACAACATTTGCATCCGCCACTGTTAATGTCCTTCCAGCCATTACTTTTATAATGGCACTCATTTTCAGGTTGGAGACAGTGAATTTGAAAAAATTCCACAGCCTAGCCAAGGTCATTGGAACCTGTATCACAGTTTCAGGAGCTATGGTCATGACTCTGTACAAAGGCCCTGCCTATCAACTCATAAAGGGGGGAGGAGCGATCGGCCACCACGGTGGCAGCGGCAGCAATGACGAACCTTCCGACCAGAACTGGGTGGCCGGTACAGTAATGCTCATATCAAGTTGTGGTAGTTGGGCTGGCTTCTTCATTTTGCAATCATTCACTTTAAAGAAGTACCCAGCAGAACTCTCACTCACAGCTTGGATTTGCTTAATGGGTATCATTGAGGGTTCAATTGCATCATTCATCTTTGAAAGAGACTTGAGTGTATGGGTCATAGGCTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGGGGTGATATGCTCTGGAATGGCTTACTATGTACAAGGGATTGTGAGCAGGGAACGTGGACCAGTGTTTTTAACTTCTTTCAGCCCACTTTGTATGATTATCACTGCTGCATTGGGTTCCCTTGTCTTAGCTGAACAAGTTCATCTTGGAAGTATATTTGGAGCTATCCTCATTGTGTGTGGGCTTTACACTGTGGTATGGGGCAAAAGCAAAGACAATAATCAGAACACAATAGATACAGGGAAAGTTGAAGGTCAAGAATTACCAATAAAGAATGGTACAAAATCAGCCTCAGACATTTTTGAAGGCATTGAGGTCAATGCCCCTGATGAGAAGTTGAAGATTGGAGCAAGATCATGA 1155 0.4407 MEEQNGSKMGFLHKVKPYLAIVSLQFGYSGMYVITMVSFKHGMSHWILSVYRHVVALIIIAPFAFVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALIFRLETVNLKKFHSLAKVIGTCITVSGAMVMTLYKGPAYQLIKGGGAIGHHGGSGSNDEPSDQNWVAGTVMLISSCGSWAGFFILQSFTLKKYPAELSLTAWICLMGIIEGSIASFIFERDLSVWVIGWDSRLLACVYSGVICSGMAYYVQGIVSRERGPVFLTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDNNQNTIDTGKVEGQELPIKNGTKSASDIFEGIEVNAPDEKLKIGARS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5073 384 PANTHER WAT1-RELATED PROTEIN 11 360 IPR030184 GO:0016021|GO:0022857
Lja1g5073 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
Lja1g5073 384 PANTHER WAT1-RELATED PROTEIN 11 360 - -
Lja1g5073 384 Pfam EamA-like transporter family 29 149 IPR000620 GO:0016020|GO:0016021
Lja1g5073 384 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020|GO:0016021
Lja1g5073 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5073 Lja-Chr1 72516346 72521097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5073 8 372 Nodulin-like Gene Family AT4G08300 66.846 7.69e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5073 - - gmx:100783910 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5073 1 72516346 72521097 Lja1g5073 1 72516346 72521097 ECH