Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g5041 | ATGGCAGAGCGTGTCTTTCTACTCACTTCTCAACCTTCACTCCCTTTCCCTTCTTCACCAACCAAAATGGCTGCTCTCGGTGGCGCCGCCGCTCGCATGATTCCTTCCACCGCCACCAGAGCCACCCTCTCACTCTCTTCCTCCTCATACTCCTCCCGTTCCTTCTTCTCATTCTCCTCCTCCTCCTCCTCCTCTTCCCGTTCCTCCTTCCAATGCTTGCGCTCCTCTCCTCGCATTTCTCACCTTTTTCTCAATCAGGGGAGAGCTGAGGTTCGTGTTTCGAGTGGAGGATTTGCAACGGTGTCTGCTCCTAAATCCTTTGCGTCTGATCCTGATCAGCTGAAGAACGCTAAAGAAGATATCAAGGAGCTTCTTAGGACCCAGTTCTGTCATCCAATTCTCATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAACATTGAGGAGTGGCCACAGAGGGGTGGAGCTAATGCTAGCTTAAGATTTGAAGTTGAGCAGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTTCAGCCAATCAAAGACAAATACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCGAAAATTCCTATGAAATATGGAAGAGTAGACGTATCTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGTCCCCCATCACCTGCTGATCATTTGCGTCAAGTTTTCTATCGAATGGGTCTGAATGACAAGGAAATTGTGGCATTATCTGGTGCACACACACTGGGTCGGTCTAGACCAGACCGTAGTGGCTGGGGCAAGCCTGAGACTAAATATACGAAAGATGGGCCGGGAGCACCTGGAGGACAATCCTGGACAGCGCAATGGTTGAAGTTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAGGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTATTTTTGAAGATCCATCCTTCAAGGTATACGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCGCATGCCAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTAATAGATGGTGCTCCAAATGCTGGGGCAAAGAAGTTTGTAGCAGCCGAGTACTCCTCTGGAAAGAGAGAGCTGTCTGAGTCTATGAAGCAGAAGATACGAGCTGAATATCAGGCAGTGGGAGGAAGCCCAGATAAGCCTCTACAGTCAAACTATTTTCTTAATATCATAATCGTTATAGCTCTTGATACTTCACTAAGCAAGCATATGATCCTAGAAGACTACAAAATTATGAACTATGAAAAACTCACTTGA | 1386 | 0.4632 | MAERVFLLTSQPSLPFPSSPTKMAALGGAAARMIPSTATRATLSLSSSSYSSRSFFSFSSSSSSSSRSSFQCLRSSPRISHLFLNQGRAEVRVSSGGFATVSAPKSFASDPDQLKNAKEDIKELLRTQFCHPILIRLGWHDAGTYNKNIEEWPQRGGANASLRFEVEQKHAANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKRDEDLLVLPTDAAIFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGAPNAGAKKFVAAEYSSGKRELSESMKQKIRAEYQAVGGSPDKPLQSNYFLNIIIVIALDTSLSKHMILEDYKIMNYEKLT* | 462 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g5041 | 461 | PANTHER | THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED | 31 | 385 | IPR044831 | GO:0004601|GO:0034599 | |
| Lja1g5041 | 461 | MobiDBLite | consensus disorder prediction | 226 | 245 | - | - | |
| Lja1g5041 | 461 | PRINTS | Haem peroxidase superfamily signature | 193 | 210 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PRINTS | Haem peroxidase superfamily signature | 211 | 223 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PRINTS | Haem peroxidase superfamily signature | 261 | 276 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PRINTS | Haem peroxidase superfamily signature | 131 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PRINTS | Haem peroxidase superfamily signature | 301 | 316 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | MobiDBLite | consensus disorder prediction | 268 | 300 | - | - | |
| Lja1g5041 | 461 | CDD | ascorbate_peroxidase | 102 | 372 | - | - | |
| Lja1g5041 | 461 | PRINTS | Plant ascorbate peroxidase signature | 131 | 146 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PRINTS | Plant ascorbate peroxidase signature | 192 | 210 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PRINTS | Plant ascorbate peroxidase signature | 211 | 223 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PRINTS | Plant ascorbate peroxidase signature | 330 | 354 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PANTHER | L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED | 31 | 385 | - | - | |
| Lja1g5041 | 461 | PANTHER | L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED | 401 | 439 | - | - | |
| Lja1g5041 | 461 | Gene3D | - | 117 | 370 | - | - | |
| Lja1g5041 | 461 | Pfam | Peroxidase | 118 | 349 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | ProSiteProfiles | Plant heme peroxidase family profile. | 134 | 418 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | PANTHER | THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED | 401 | 439 | IPR044831 | GO:0004601|GO:0034599 | |
| Lja1g5041 | 461 | SUPERFAMILY | Heme-dependent peroxidases | 110 | 370 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Lja1g5041 | 461 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 261 | 271 | IPR019793 | - | |
| Lja1g5041 | 461 | Gene3D | Peroxidase, domain 2 | 239 | 362 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g5041 | Lja-Chr1 | 70992132 | 71001380 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lja1g5041 | 134 | 367 | Peroxidase | AT2G22420 | 27.863 | 6.79e-18 | 82.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g5041 | K00434 | - | zju:107421087 | 664.07 |