Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5025 ATGGAGAAAGTTTCTGTCACATTGGAAACTGATCTGCAAGCCGGAGCCAACCACGGATATGAGCTGCTGTGGGTGATACTTATTGGGTTGGTGTTTGCTCTTATAATTCAGTCATTGGCTGCAAATCTTGGTGTTTGTACTGGCAAACACCTTTCAGAAATATGTAAAGCAGAATACCCATTATTTGTGAAGTACTGCTTGTGGCTATTAGCAGAAGCTGCTGTCATAGCTGCAGACATACCTGAAGTGATTGGCACGGCCTTTGCGCTTAACATACTCTTCCACATACCAGTATGGGTTGGAGTTCTCCTAACTGGCTGCAGCACTCTCTTGCTTCTTGGCCTCCAGAGATTTGGGGTGAGGAAGCTGGAACTGCTTAAAGCAATCCTAGTTTTTGTGATGGCTGCATGTTTCTTTGTGGAAATAGCCTATGTCAAACCCTCTGCTTCTGGTGTATTAAAAGGTGTGCTTACACCCAAACTCAGCAATCATGAAGCCACAGGCGATGCTATTGCCCTTTTGGGTGCCCTTGCACAATCTTTTCCTCCACTCTGCTCTGCTCTAGTGCTGTCTAGAAAAGTACCTACTTCCGTTCGCGGCATCAATGTAAGTCACTCTTCAAACAAAGAAATTTATAGTTCTGCTTGA 648 0.4475 MEKVSVTLETDLQAGANHGYELLWVILIGLVFALIIQSLAANLGVCTGKHLSEICKAEYPLFVKYCLWLLAEAAVIAADIPEVIGTAFALNILFHIPVWVGVLLTGCSTLLLLGLQRFGVRKLELLKAILVFVMAACFFVEIAYVKPSASGVLKGVLTPKLSNHEATGDAIALLGALAQSFPPLCSALVLSRKVPTSVRGINVSHSSNKEIYSSA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5025 215 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 7 202 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g5025 215 PRINTS Natural resistance-associated macrophage protein signature 67 93 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g5025 215 PRINTS Natural resistance-associated macrophage protein signature 95 114 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g5025 215 PRINTS Natural resistance-associated macrophage protein signature 120 141 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g5025 215 Pfam Natural resistance-associated macrophage protein 9 177 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g5025 215 PANTHER METAL TRANSPORTER NRAT1-RELATED 7 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5025 Lja-Chr1 70625591 70626987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5025 7 201 Inorganic Solute Cotransporters AT1G15960 62.245 6.47e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5025 K21398 - mnt:21396554 305.834