Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4989 ATGCAGTTATATCATCATCCATTTGATTTGGACAGCCAGAAGGTGAGACTTGCATTGGAAGAGAGAGGCATTGATTATACATCTTACCATGTCAATCCTGTAACCGGCAAGAATTTGGATTCCTCATTCTTCAAGATGAATCCCAGTGGAAGGCTACCTGTTTTCCAAAACGGCTCTCACATCATATACAAGACTATTGATATAATCCAGTACATTGAAAGAATTGCTGAAGTATCCTCAGGGTTTGAGAATATCAGTACCAGCAGCACAGAAGTGATTGAATGGATGCAGAAGATACAAGAGTGGGATCCAAAGTATTTTTCCCTTTCCTATATTCCGGAGAAAAATAGGATTTATGTTTCCAAGTTCATTAGGCGGGTGGTGATAGCTCGAATGTCTGAGTGTCCTGAATTAGCAGGTGCATACCATAAGAAGTTAAGAGAGGTCTATCAGACTGAAGAAAAATTGCAAGACCCAGATGTTTTGAGAAGGAGCAAGGAACATTTGGTTAGATTGCTCGATGAAGCAGAGAGGCAACTAAATGAAACCCCTTATTTAGTAGGTCAGGAGTTTAGCATGGCTGATGTGATGCTCATTCCGGTGTTGGCTCGTTTAGTTCTCTTGGGTTTAGAGAATGAGTATATAACTTGCAGGCCAAACATTGTTGAGTATTGGGTTATGGTTCAGCAGAGACCTAGTTATAGAAAGGTGATTGGTAGGTATTTTGATGGTTGGAGAAAGCACAAAACATTGTTCAAAACTTGGTGCTTTGTTTGTGTTAGAAGTTTTCTGAAGAGGTTCTAG 804 0.4005 MQLYHHPFDLDSQKVRLALEERGIDYTSYHVNPVTGKNLDSSFFKMNPSGRLPVFQNGSHIIYKTIDIIQYIERIAEVSSGFENISTSSTEVIEWMQKIQEWDPKYFSLSYIPEKNRIYVSKFIRRVVIARMSECPELAGAYHKKLREVYQTEEKLQDPDVLRRSKEHLVRLLDEAERQLNETPYLVGQEFSMADVMLIPVLARLVLLGLENEYITCRPNIVEYWVMVQQRPSYRKVIGRYFDGWRKHKTLFKTWCFVCVRSFLKRF* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4989 267 SUPERFAMILY Thioredoxin-like 1 75 IPR036249 -
Lja1g4989 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 252 IPR010987 -
Lja1g4989 267 CDD GST_N_family 1 73 - -
Lja1g4989 267 SUPERFAMILY GST C-terminal domain-like 136 239 IPR036282 -
Lja1g4989 267 Coils Coil 162 182 - -
Lja1g4989 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Lja1g4989 267 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Lja1g4989 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Lja1g4989 267 Pfam Glutathione S-transferase, C-terminal domain 161 209 - -
Lja1g4989 267 Gene3D - 133 238 - -
Lja1g4989 267 Gene3D Glutaredoxin 1 75 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4989 1 267 Glutathione S-transferase Gene Family AT1G77290 68.165 2.91e-142 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4989 K22077 - gmx:100792543 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4989 1 69840094 69842936 Lja1g4989 1 69840094 69842936 ECH